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Mutant Lines
54-5094-1

54-5094-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 15815407 [Map]; Strand: w
- AT5G39500.1 - [+] show detail - GNOM-like 1
  Distance: 0; Region: exon1 (CDS)

CTCCAAACCG TCTAAAGGTG CAGGTGGCAG TCCATGATTA ATTCTGAAAT 
TGGTGCAGTT TTGGCTGTGA TGAGGAGAAA TGTACGGTGG GGTGTTCGAT 
ATATAGCAGA TGATGATCAG TTAGAGCATT CTCTTATCCA TTCTTTGAAA 
GAATTGCGTA AGCAGATATT TTCATGGCAA AGCAATTGGC AATATGTTGA 
CCCTAGATTG TACATACAGC CCTTTTTGGA TGTTATATTG TCTGATGAAA 
CTGGTGCTCC GATTACTGGC GTTGCTTTGT CATCTGTTTA CAAGATCTTA 
ACCCTCGAAG TTTTTACTCT TGAAACTGTG AATGTGGGAG AGGCAATGCA 
TATAATAGTT GATGCTGTAA AAAGCTGTCG TTTCGAGGTA ACGGATC

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 15815291 [Map]; Strand: w
  - AT5G39500.1 - [+] show detail - GNOM-like 1
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-5094-1 - 3-prime edge
```
GTTTGGAGTG ACATCTCTTG AACTCTCCAT GGAACGAGTT ACTTCCCGAA 
GGATGATTCT GATACCCCAT ACTCGCCCCA ACTTCTTGGC TCAATCACAA 
GAACACACTC CAAGCATGCA AGCTGCAAAT AGTCAAAGCT
```

AT5G39500.1

Model type: Protein coding
Short Description: GNOM-like 1
Curator Summary: Encodes GNOM-LIKE1/ERMO1, a member of ARF-GEF family. Required for endoplasmic reticulum (ER) morphology.
Computational Description: GNOM-like 1 (GNL1); FUNCTIONS IN: ARF guanyl-nucleotide exchange factor activity; INVOLVED IN: ER body organization; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904); BEST Arabidopsis thaliana protein match is: sec7 domain-containing protein (TAIR:AT1G13980.2); Has 2885 Blast hits to 2457 proteins in 243 species: Archae - 0; Bacteria - 32; Metazoa - 1491; Fungi - 682; Plants - 262; Viruses - 0; Other Eukaryotes - 418 (source: NCBI BLink).
Link: InterPro Scan - TAIR