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54-5145-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26219043 [Map]; Strand: w
      • AT5G65600.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: -890; Region: promoter
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -215; Region: promoter
    Flanking Genome Sequence: 54-5145-1 - 3-prime edge 
    CTCCTAGGTC GAGATCAAAA CCTTCCTAGG TGCTCTTCGC TTTCACTGCC 
    CCCAATCTCT TCCTTCTCCG CTTGTGTTCT GAAATCATCA TCGATTGGGG 
    CTGACATAGA GGATGTGGGA GAAGTAATTC AACCAATCAC GAATCATCAT 
    TCATCCCGCG ATNAGGTATT AAAAAGAGAA AGAGATGTTT TTGNTNATTT 
    NTNGTTTNTA GAAAAAGAAA GANNATGANN GTGNTTNANA AAGAATNAAN 
    AANAAGATTA AGANGNACAA TNGGGGNTCT AAATTNTNAA GCCNACAACA 
    NGTTTTGGGN NCCCNNTNNG NGGCCCCNTT NGNAAAAAAN NNAANCNACC 
    CNACCCNNGA AANTGGNTNN NNAAGCGGGG GGAAAANTGC CNCGNGNGNN 
    NNATTNTNTG GGGGNGGNNG GGTNCCCCCN GGGGNAAAAN TTGCGCCCNG 
    GGGAAANCAC CNTNTNNAAA AANNGNNNNN NNGGGGNGGA NTGAANGNGG 
    TANNNNAACC CAAAANGGGG GNNNATANAA GACANNCGNA NGANGGNCAA 
    NANTNCNNTC ACNCNAAAAN GNGNGGNAGN NGAAANGATT TTTNGGGGAA 
    AATNNNAGNG GGAGNGGNCG CTAAGNGNTN NGNGCNNNTT NAGNNNNNGT 
    GNTCANANGN CGGAAAAAAA ANNGGGGGGC CGNANTNNAA NCNGNGTCCA 
    GCGTAGNCNT CNNANTNAGA NNGNNNGAGN NGGGANGGAA ANANCCAANA 
    AAACNCATGC NCAGNNNNGN NNTNGANGGN TGGNGNTANN AAGNNGTNNA 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26219159 [Map]; Strand: w
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -99; Region: promoter
    Flanking Genome Sequence: 54-5145-1 - 5-prime edge 
    CCTAGGAGGA ACTCTAACAT GAGGAAGAAA CCCCAATCAA AGAATCCATG 
    TACCAGACAA AGAGATGAGA GACGATCAAC TTTTGATCAA AGACGAAAAG 
    AGACTTCTCA GATTTTTCAG AGTACGACAC NGGTGGGCTT CGACTTCTCG 
    TTTCCATTGA CGACGGCGGA GATGGCGACA GAGAGAGAGA CGATTGAGAG 
    GAGAGATCAA AGGATTCTCG TTTCCATTGA CGACGATGGT GGAGGAAGAA 
    AGCAATCATC AAAGACAAAG AAGCT

AT5G65600.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin protein kinase family protein
Computational Description
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G10530.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65610.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR