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Mutant Lines
54-5183-1

54-5183-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 4823905 [Map]; Strand: w
  - AT5G14900.1 - [+] show detail - helicase associated (HA2) domain-containing protein
    Distance: -324; Region: promoter
  - AT5G14910.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-5183-1 - 5-prime edge
```
CTTCTACCTT TCACTCGTTT TGCAGAACCA AAAGCCCTAA TCTTTCTTCG 
ACCCACCTTC TTCCTTTGTC GAAAAACCTC AACTTTCGGA CCAGAGCTAT 
CGGAAATAGC CGCAATTGCA GTTTTGCTGG GTTTATAAAA CAAAATCGCC 
TTGGATTGAG GAAGCT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 4823782 [Map]; Strand: w
- AT5G14900.1 - [+] show detail - helicase associated (HA2) domain-containing protein
  Distance: -201; Region: promoter
- AT5G14910.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
  Distance: 0; Region: exon1 (5UTR)

GAAGCTGCNC TCGACGCCAT TTTTCACTAC TGACCCAATC TTNTTTCACT 
CGATAAGGTT GTGCGAGTTA CAAGAGAAGA AGGTTTNNNC ACTTTTTGNG 
TGTTGCCNCT NNTCTCACAT TNTACANTNA TAATCNCNCC TGTCTAAAGA 
CNTNTATNCC CTNGAGANAA GNTNTCTTNC TGTCTTANGG NTCATANGTN 
CNNGGNNCNT TATNTNNCCN TGNCNATCAA AAAGGATGTT TTTTNNTAAN 
GNCAATGNCC ATCNTTGCNA ACACANTNNT NANNATNNNC GGNNTTNTNG 
TNATNGANAC TCTTNTCTAT ANCANTAANA AATACANAAN GGNTTCTGNN 
NNNAACGCTC GNANCNTTTG NCGANAGCNC CNAAAATNTN AGNNCTCGGC 
ACGNAGNCNN AACNNCTNTC NNANTNGNGG CGTTTTTNNC ANNGNCANCG 
GAAGANATTC CNCCCGCGGG GNCNGNGGAN CCCNCCCCGC CCNCCCCATN 
TTAACNTGAG NGGNNCCAAN GAAGAATTGN TNGACATGNG GNGNNAGGGN 
NAANNCCGGG GGGNGNCGCA GNGNNTNNGG GTTNGNNAGN GCCNNGTNNN 
NGNNGGNNCC TCGCTNTNCT CTNCGNGGCN CNNGNNGCCA NNGGCAGGGG 
AGNGGTTNNG CNGCGGGCGN GCNNCGNNGN TCTCCNNCGC GACTNCNGGN 
GNGTCTNANT CNGCCNCGGG CGTNGTTCGC NNNNNCNGGG CCCGNTTGGG 
NTCNGCGACG TNATNNNCNG ANCNNG

AT5G14900.1

Model type: Protein coding
Short Description: helicase associated (HA2) domain-containing protein
Computational Description: helicase associated (HA2) domain-containing protein; FUNCTIONS IN: helicase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), Domain of unknown function DUF1605 (InterPro:IPR011709); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT3G62310.1); Has 5771 Blast hits to 5717 proteins in 1127 species: Archae - 0; Bacteria - 1821; Metazoa - 1566; Fungi - 1074; Plants - 520; Viruses - 0; Other Eukaryotes - 790 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G14910.1

Model type: Protein coding
Short Description: Heavy metal transport/detoxification superfamily protein
Computational Description: Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR