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ET10792

CSHL Arabidopsis genetrap mutant lines

Original: ET10792

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET10792

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1428639 [Map]; Strand: w
      • AT2G04190.1 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: ET10792 - 5-prime edge 
    ATCTAACCGT ATTTCGGACC GTAACCGGAC CGTTTATTAA CCGTAACCCA 
    ACCGTAACCG TATAAAACGG TTAATAACCG TAACCGTGAA AATAGATCAG 
    TTACGGTTAA GAAAATATAG TAACCGTAAC CGTTAATTAA CCATAACCGT 
    ATCAAAACCG TCGGTTAACC GCGCGGTTAA CCATATTGCT AAAACTTTAA 
    AATATAGTTG TAACTGTATA TAATTCTAAA TAAATAATTA TTTCACTAAA 
    ATAGTACCCT AAATCGTTTA ATATGCCCAC TACTACGATC GAAGTTACTA 
    CACTACTCTT TTTACCATTA AGTAGTTCAT ATTATTATTA TTTCTACTCT 
    TAAAACTGTT TCTTAATACT CACAACATCT TTTCTTTAGT ATTGTTTTTG 
    TTTGGAAATT GTAATTAATT CAATCATTAT AATTATGACC ACTAATTTGT 
    TTATTCATTG GTTTATTTAA GAAAAATAGA TAGATGATTT ACTATAATTA 
    TTTAAAACAC ATAATCACGT AAAATAAATA TTATTTGATA TATCACTATT 
    TC

AT2G04190.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G04170.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR