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ET10946

CSHL Arabidopsis genetrap mutant lines

Original: ET10946

Phenotypes

Morphological phenotypes

Original description

  • some anthocyanin accumulation in cotyledons of some embryos and within siliques
Anatomical entity
/structure development stage		 Phenotypes
seedling (PO:0008037)
  • dark green (PATO:0001249)

Original: ET10946

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11441275 [Map]; Strand: c
      • AT1G31870.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1166; Region: intergenic
      • AT1G31875.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 1638; Region: intergenic
    Flanking Genome Sequence: ET10946 - 3-prime edge 
    TTACCGACCG TTATTACCGT TTTCATCCCT ATTCGTACAT TGTAGTGGGG 
    TACCGGGGAT GTTCGAACTT GGGTTATGGG GTGTAAATGA CACTAGATTT 
    ACCAACTTAG CTACTATCTC TTTAATAAAT TTCGTGCATT AAATTGTATT 
    TGTAGATTTA ACCTGGGTCA ACTGACTCAT CTTCTCCATG AATGTGTCCG 
    CCACTGATAC ATTGTAATTT CATCAAATTG TTAATTTTGT CTATTGTTTT 
    GATTAAACTA AGAGAAATTT TGAGTTAAAT AAAAAAAAAC GTATTTTCGG 
    ATAAATTTAT ATCCATAGTA TTTGTTCTCT CTAAAAAAAA CTTTCTGCAA 
    TTAAGAATTT TTGAAATTGA AAAACAAAAT CGAACCATAA TCTCACTGTT 
    TTCGAATATG TCAATTCAAA TTAAACACTG TTTTAATAGT TAAAAGGAAA 
    AGGGGAGACA TTAGGAAAG

AT1G31870.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2050, pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303 Blast hits to 9618 proteins in 489 species: Archae - 8; Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942; Viruses - 128; Other Eukaryotes - 2334 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G31875.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR