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ET10984

CSHL Arabidopsis genetrap mutant lines

Original: ET10984

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET10984

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25407537 [Map]; Strand: w
      • AT1G67770.1 - [+] show detail - terminal EAR1-like 2
        Distance: -506; Region: promoter
    Flanking Genome Sequence: ET10984 - 3-prime edge
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    GCATTAAATT GATTTGAATT CATAAGATAG TCTGTATTAA GCACTGGTTG
    GATTTGAAGT GCAACATTGA CATACATTAT ATCTTCTTTT TTGGGCAAAA
    GCTTTGCTTT CATTCAAACT CAATGGAATA CAAAAATTAG AAGTCTACTA
    ATTTAGCGAT CACAACAATA AGATTAAAGG CATCTAGAGA TGCAACACAT
    AGTGAACAAG GATAGTCCGA CGAATCCATG AAGGAGGAGG GAATAAACAA
    AGGATTCAAA ACTAGAAGTA TATAAGAGAT GATGGAGCTT TGTTGTTTGC
    TCGGCTTCAA AACTAGAAGC CAAGGACGAT CCGTTTCAGA AACAGTTCTC
    TCCATAAAGG AGGAGGGAAT AAACAAAGGA TTCACAAAAG AAGGATTAGG
    GAGGCCCTCT AGGTCAGATA TGTAATGGTT TGGAGCTATG GAGTTTGACA
    TACATTATAT CTATCTATGT ACATATAATA AACGCATGTC ATGTAAATAT
    AATTATAGTT CGAGGGTAGG ACCAAATAGG GACCAGGGCA ATTCCTTGTT
    TTAAGGAATG TTATTGTTAC CTACTTCCTT GTTTTGGGCT GTCATTTGTT
    TTTGTCATGT TTATACCATA TCCTTCATTT ATTACATAAA CTACATCTCT
    AGCTAATAAT AAAAAAATGT GTGAAAACTT GAATATCTTC TATATATTAT
    TTCGGAATTC AGCTA
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET10984 - 5-prime edge
    CATGGACTAA ATTTCTCCCG CTGTTTAACC TTCTATGCAA AAAAATAAAC 
    GATTGTTTGA TGAAACAAAT GTAGTAGAAT TGTAGCGTAT GAGTTTCTAG
    TCAAAGTCTT TAATAGGAGC AATAGATTTA GCGTATTGCG TACAGATTTT
    AGTGTGAGCC ACTGTTATTT TTTTCCCATG TATCGTAGAA ATCGATTTTA
    GCTTCTTTTT TTCTCGTGTG CTAAAATGGA TGTTAATT

AT1G67770.1

Model type
Protein coding
Short Description
terminal EAR1-like 2
Curator Summary
Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL2 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins. Expression patterns were similar to TEL1, with lower expression levels in most tissues examined.
Computational Description
terminal EAR1-like 2 (TEL2); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), RNA recognition motif 2 (InterPro:IPR007201), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: terminal EAR1-like 1 (TAIR:AT3G26120.1); Has 114879 Blast hits to 113543 proteins in 3746 species: Archae - 105; Bacteria - 13385; Metazoa - 42146; Fungi - 9605; Plants - 32529; Viruses - 373; Other Eukaryotes - 16736 (source: NCBI BLink).
Link
InterPro Scan - TAIR