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Mutant Lines
ET11158

ET11158

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET11158

Determination of insertion point(s)

3 prime edge [+] show sequence

Not mapped

CGGTAGAGGT ATTTTACCGA CCGTTACTGA CCGTTTTCAT CCCTACTTGA 
TTCATAACCC TCTTCTACGG GTTTTGCAGA

3 prime edge [+] show sequence

Chromosome: 3; Position: 2194605 [Map]; Strand: w
- AT3G06960.1 - [+] show detail - pigment defective 320
  Distance: 0; Region: intron4 (CDS)
- AT3G06960.2 - [+] show detail - pigment defective 320
  Distance: 0; Region: intron3 (3UTR)

AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTT 
GATTCATAAC AATCTTCTAC GGGTTTTGCA GATTGTTGGA CCGTTTAGTT 
TCAAAGTGGA GTCTGGAATT GAGATCGATC TGAGGAACGG AGCTAACCCT 
GTGACTGTAG ATAAGACAGT ATTTGCTATT GAATATGCTC TTCAAGTGCT 
TCTTTCTGCC AAGGCTGTTG TTTCGTACTC CCCAAAACAG AATGAGTTCA 
TGGTTGAGCT TCGTTTCTTT GAGACATAGT ATCAGGATTT TCCACTCAAA 
ATGTCAAGCT TGATCCTGTG AAGATTGTAG TCTTGCAGAG AAGTAAATAC 
TAAATAGACA ATGTTCTAAT TGTTCAGTTT CTTATGTCAA ACAGAAGAAT 
GTTTCAATAG AAGGGAAGTT TACATTTTGT TATAGTGTGA TGTCTACCAA 
AACTAGTTAC AGGACAATCC AATGGAAGCT TTAGATGATC TTCCTTATAC 
TTAACAGACA CAAGACAAAG ACCATGAGGC GACGCAGGCA AACTAGTATA 
CTTTGCAAGC ACCCTCCTGT CTTTGGTTTC GAGAATCATT GGGACAATGT 
CTGAATC

5 prime edge [+] show sequence

Chromosome: 3; Position: 2194660 [Map]; Strand: w
- AT3G06960.1 - [+] show detail - pigment defective 320
  Distance: 0; Region: intron4 (CDS)
- AT3G06960.2 - [+] show detail - pigment defective 320
  Distance: 0; Region: intron3 (3UTR)

CCTACTTTCT CCCTGGAATC AGTAGCTGAA ACTATGAATT TGAGAATTTC 
TGTGTCTGGT AGACTGTTTG CTCATCGTAG AATATCGTTT ATTTTACCTG 
TTGCTGTAGA GAAACTAATA CTTCAGGGCA GATTTTCTGA AATGCTTCTA 
AACTAGGCTG CCGAGAATTT AAAAGATCTT GTGCGACGCT AGTGGCACCG 
GTAAGAAACC TCAAACCATG CGGAAAGTCT AATCTAGCAT GGAAACGGGT 
GAGATCAAAG AAGAATTTCT GGAAGTTTCC ATATTGAGCT GTGAGTGATG 
CCCGCCCTAA GGCATCAGCC ATGAATCCGG AATTTACAGA TGGAAAATGA 
AGAGAGAACC CTCCAACACC CTCAGAATCA TTTTCAAATT TTGATCTGAT 
TGAATTTTCA CCAAATGCTG CGGTCATCAC AGAGCCTGTG GGATTAATGA 
AACTCTTAGT AACAGCACCA AAAAGATCAT AAAAAAGACC CGTGCTTCCA 
AACCTGAAGG CTCAAGGCTT ACTCATACAT AAAATTTTCA ATCAGAGGAA 
AACAAATTAG CTATTCAATA GTCGAAAGAA ACAAAATATC CCAAAAATCC 
CATTTCCATC ACTAGTTCTG TAACATCAAA TATTGGAATT GGAGAACTCA 
AATGATAAGA GTTGAACAAA ACT

AT3G06960.1

Model type: Protein coding
Short Description: pigment defective 320
Curator Summary: Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.
Computational Description: PIGMENT DEFECTIVE 320 (PDE320); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: acylglycerol transport; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44640.1); Has 48 Blast hits to 47 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06960.2

Model type: Protein coding
Short Description: pigment defective 320
Curator Summary: Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.
Computational Description: PIGMENT DEFECTIVE 320 (PDE320); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: acylglycerol transport; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR