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ET11211

CSHL Arabidopsis genetrap mutant lines

Original: ET11211

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET11211

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22859998 [Map]; Strand: c
      • AT5G56450.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET11211 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATT 
    TGCTGGAGAT GATTTGGTTC CTTGCGTGGA TTCGAACTCA AGCCACAACG 
    AGATAAAGGA AGGTGTTAGC TTTCAAGAGA TGTTGCGAAA GATAGATGAA 
    CTGAGACTGG ATAATTCTGA TACATCAAAT ATTGGGCTTG GGCTCAATGT 
    CTACAGGCCC AAATATACTT ACTTTAACAA CATAACATAT CTTCAAAACC 
    AAAACCCATC TATATTCCAT TATAAGAAAC AAACCGCATT GAGACCAAAA 
    TGATATTAAA CAAACCTTTG TTTTCAGAAG AAGCATCGAG TTGATCACAA 
    AAAAGTGTTG ATAACTTGAG AAGAGGCCAA GTCCTATTAT TCAAATTTAA 
    TCATGGTTTC ATCTTCTTCT AAACAAAATG TAAGAGCGAC AACATAAGAA 
    GCTATAAGAG CTTTCTCAAC ACATCTAACT TTCAGACCAA ATGCCTCTAG 
    CGTCTGGAAA AACCGACCTA TATATATTAC AATCTCTTTT CAATCCAACA 
    TAAGTTTACA TGAGCTTGAA GCTCTATGCA GAGAAACAAC CTCCTTATGT 
    TTCTGAAATC TCTCTTTCAT GGGAAACACT CTTTGAACAG AGAAAGCCGC 
    AGTCTTTAGC TGTCTTGCAT TCTTTAGGAT GA

AT5G56450.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR