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ET11251

CSHL Arabidopsis genetrap mutant lines

Original: ET11251

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET11251

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28676047 [Map]; Strand: w
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -2113; Region: intergenic
      • AT1G76430.1 - [+] show detail - phosphate transporter 1;9
        Distance: 2888; Region: intergenic
    Flanking Genome Sequence: ET11251 - 5-prime edge
    CCTACTTTCT CTCTGTCGAC ACTGCGTCAC AAAACATATT ATTGGCCCCT 
    GTCAAAGTAT ATTTTTTTTC ATCCTTTAAA ACTAATCTGT CTGCGATAAT
    AATATCATTA AACTTGGCAG AATATGTGTA TCTGGTATAA TAATTTGGAA
    ATCTTTTGTA CTCGTACGTC ATTTCAGTAA CATGCACTAT TTCAGTTATT
    TATTGATATA GTAAAAATTA AAGTTAATCC AGTTAAGGAG CAGAAACGGT
    ACTGGTCTGT GTAAACAGAA CTAGTGTATA AAATAATAGT CCAATTTGTT
    TCAGAATTAC AGGGCTAGTA ATATACAGTA TAATGTGACA CTTAAACTTT
    AAGAGATTAG GTGAAACAAA AATCACTAAA ATGAATATAG ATGACTGTTT
    GTCACATTTC TTTTATAGTA TATACCTGTA TATGTCAATC AAATGACAAA
    GAGGGTCCCC TATTCTCTTG CTCGTCTTTG TCTGTTTGTA TTTAAAATGT
    CTGTATCAAA GTCCATTTTA AAAAGCTTTT ACAATATTTT ATTTTAGAAA
    AATGACAACA AAAATAAAGT TTACCTGTAG AGAAAATACC AAAAACAATG
    AGTAATATCA ATTATAAATG TTAAAGTTAA ACTGCAAAAA TATATATTAC
    ACATCGAAAT AGATATTTTA GTTTAAAAAA TTTCAGAACA CAAGTGGATT
    GACCCACCAA TTTTTACTGT TTTTTT

AT1G76420.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary
Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Computational Description
CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G76430.1

Model type
Protein coding
Short Description
phosphate transporter 1;9
Curator Summary
Encodes Pht1;9, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).
Computational Description
phosphate transporter 1;9 (PHT1;9); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;8 (TAIR:AT1G20860.1); Has 32041 Blast hits to 31917 proteins in 2260 species: Archae - 700; Bacteria - 22282; Metazoa - 2246; Fungi - 4097; Plants - 1720; Viruses - 0; Other Eukaryotes - 996 (source: NCBI BLink).
Link
InterPro Scan - TAIR