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ET11618

CSHL Arabidopsis genetrap mutant lines

Original: ET11618

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET11618

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21702974 [Map]; Strand: c
      • AT3G58660.1 - [+] show detail - Ribosomal protein L1p/L10e family
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: ET11618 - 5-prime edge 
    CCTGTTCACC ATTTCGATGT TTCATAGAAG TAGTACAAGA TATGAAATGG 
    CTCAAAAATG TAATAAGAAC TACGATAGAA AATAAAACAT AAATCATACT 
    CAAAAGCAAA CACTCAAGAC CTTCCTCTGC CTCATTTCCT AAGCACACTC 
    TTTCTCTTCG GCTTCAATCC ACCACCAGAT TCGTCTTTCG CAACCATTGT 
    TGTCTTTTTC GCCTGTAAGC CGACCTTGCT CTTCTCCAGC TTCACAACAT 
    CTGGTTTAAC TTTCCCCTTG ACCGCAGCTT TCTGCATAGG TTTCTCAACA 
    TCGGGTTTCG ACTTCCCTTT GGCAGCTTTC TTCATCGGTT TCTCAACATC 
    AGGTTTCAAC TTCCCTTTGG CAGCTTTCTT CATCGGCTTC TCACTCTCTG 
    CAACTTCACT TACCTCCTTC TTCCTCTTCT TCC

AT3G58660.1

Model type
Protein coding
Short Description
Ribosomal protein L1p/L10e family
Computational Description
Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: nucleolus, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42650.1); Has 3644 Blast hits to 2818 proteins in 411 species: Archae - 34; Bacteria - 198; Metazoa - 1370; Fungi - 494; Plants - 482; Viruses - 5; Other Eukaryotes - 1061 (source: NCBI BLink).
Link
InterPro Scan - TAIR