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ET12065

CSHL Arabidopsis genetrap mutant lines

Original: ET12065

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12065

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 275069 [Map]; Strand: w
      • AT3G01760.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET12065 - 5-prime edge
    TCAGATCCCA TGCATCATGT GGCTGATCCT AAAGAAACCA AAGAGATTTA 
    GTCTCTCATG GTGTATGAAC TGGGTAAGAT GTTTGTAGTC CTCAGATCAA
    AAGCTAAATA TGACACTTAC AGCTAAGTTA AATCTTTTTT TTTGGAGCAG
    TTTTGCATCA TTTTTGGGCT TGTGCTGATG ATCATAGCAC CTATTGGGGG
    ACTGGCCAAA CTAATCTATA ATATTCAAAA GGGCACTCTA CCTAATTCAA
    GATGCAACTT ACCTAAACAC TGACGATTGC CTTGTAGGTA ACATAAATTG
    GTTGGACGCA ACAATTTCGC TGGTACTAGA GTCTAGAAGC TCTATTACCA
    AACTCGAGTG TAAATCTATA GAATTAACTC TGAGACATGC TCCCTCTCTC
    TCTCGGTGCT GTCGGTCATT GGTTTATTGA ATTAACCAAA ATTTTACTCA
    CTACACAAAG TGTTATTGAT TGTTTACTCG GATAAAATGC CATCGCATTG
    GTTAAATATC AATCTAACTA TCATTTTTTT ACAATAACTC ATGTACACTT
    GACTGCTGTT ATCCAAGACA CAACACACTC ATGAATCTCA GTCGATTTCA
    CCCTCTTCTA CTT

AT3G01760.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G61270.1); Has 4381 Blast hits to 4371 proteins in 390 species: Archae - 5; Bacteria - 296; Metazoa - 1264; Fungi - 731; Plants - 1536; Viruses - 3; Other Eukaryotes - 546 (source: NCBI BLink).
Link
InterPro Scan - TAIR