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ET12065

CSHL Arabidopsis genetrap mutant lines

Original: ET12065

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12065

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 275069 [Map]; Strand: w
      • AT3G01760.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET12065 - 5-prime edge 
    TCAGATCCCA TGCATCATGT GGCTGATCCT AAAGAAACCA AAGAGATTTA 
    GTCTCTCATG GTGTATGAAC TGGGTAAGAT GTTTGTAGTC CTCAGATCAA 
    AAGCTAAATA TGACACTTAC AGCTAAGTTA AATCTTTTTT TTTGGAGCAG 
    TTTTGCATCA TTTTTGGGCT TGTGCTGATG ATCATAGCAC CTATTGGGGG 
    ACTGGCCAAA CTAATCTATA ATATTCAAAA GGGCACTCTA CCTAATTCAA 
    GATGCAACTT ACCTAAACAC TGACGATTGC CTTGTAGGTA ACATAAATTG 
    GTTGGACGCA ACAATTTCGC TGGTACTAGA GTCTAGAAGC TCTATTACCA 
    AACTCGAGTG TAAATCTATA GAATTAACTC TGAGACATGC TCCCTCTCTC 
    TCTCGGTGCT GTCGGTCATT GGTTTATTGA ATTAACCAAA ATTTTACTCA 
    CTACACAAAG TGTTATTGAT TGTTTACTCG GATAAAATGC CATCGCATTG 
    GTTAAATATC AATCTAACTA TCATTTTTTT ACAATAACTC ATGTACACTT 
    GACTGCTGTT ATCCAAGACA CAACACACTC ATGAATCTCA GTCGATTTCA 
    CCCTCTTCTA CTT

AT3G01760.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT1G61270.1); Has 4381 Blast hits to 4371 proteins in 390 species: Archae - 5; Bacteria - 296; Metazoa - 1264; Fungi - 731; Plants - 1536; Viruses - 3; Other Eukaryotes - 546 (source: NCBI BLink).
Link
InterPro Scan - TAIR