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ET12427

CSHL Arabidopsis genetrap mutant lines

Original: ET12427

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12427

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 138177 [Map]; Strand: w
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -371; Region: promoter
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -371; Region: promoter
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -374; Region: promoter
    Flanking Genome Sequence: ET12427 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCTATCAA 
    CCATTAAATT AAAGAGCCTC CTAATATACA TATGGCCTTT GGCTTTTGCC 
    AATGTTTAAC CCCTTTATAT TTCCCATAGT CACATATTTC TCATCAGATT 
    TTAAAATGTT ACATTCATAA CCCCAAATCA TTCCTATGCA CCATCTACAT 
    TATGCATCTG AGCAGTCTAA AATACCTTGC ATTACCGTAT GATTAACTTG 
    TTTATAAGTA AGCGTATAAC TGAATTACAA AGAAGTTTCG GGTAAAACTG 
    TAATCAATCA TCAAAATGAA AAGGACCAAA ATGTAAAAAC ACTAACTTAT 
    GAGGGATTCA TGTGTTATTC AATGGTTTTT GTCTCTCCCC CTCCAATTAC 
    TAACCAATCG TCTTTCTCTC TTCATTGACC CCTTTTTTTG AAATTACCAA 
    ATCTCTCT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR