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ET12452

CSHL Arabidopsis genetrap mutant lines

Original: ET12452

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12452

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6681785 [Map]; Strand: w
      • AT4G10865.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: ET12452 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCCC TAGATGCAAG TACATTAAGA 
    TTATAAGAAA ATGATTATGC ATAGCACGAT GTTATACAAA GAGCCAAGTA 
    AAGTACATTT ATAATATACT ACCTCCAGAA AGTCAATTAC TTTATTGCTC 
    TGAAAACGAG CAAAACTAAC TTCATATTTT AGGAAAAAGG ATTGACACCC 
    ACATATGATG GATAAAGAAA ATATTTTGTT TAGAGTACGA TAGTTTTTAA 
    ATAAAAAATA TATAAGAAAA CTAAAATGTG TCTTTTCCGG CACATCAATA 
    AAAATTAAAC CAATCGGAAC AAACTAAATG ATACACCTCA TTTTCAAATT 
    CGTCATTTAA ACCGCGATCG GATATTAGAC GGTAGAAAAG AGCGGTCCAT 
    AGTGTCNTTG TAAAATTTTG GTGAATTTCA ATTTTCTACC TAAATAATTA 
    TACTTCTCTC TTCTTTTATT CTGGGATACA TTATTTTCTT CAAAAATTAT 
    ATGATCCATT TTTATTTTTT TTTGTCAACA AAAGATCCTT TTTTTAGGCT 
    AAATTTTTTT AATTGTTACG TCATTTAAAT CATTAGCCGC AAAAGCCCAC 
    AATTTCAAAA AATAATAATA TTAAAATGTA ATATAGAAAG AAGGATTCGA 
    AAA

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET12452 - 5-prime edge 
    AAACCCCCCA ACCCCAAGCC TTCTTTACCC GAAAAACCCC CCCCAACGGG 
    GTTGGCCCGG GTTGCCCGGG GAACCTCCCT CCGGCAAAAG TTT

AT4G10865.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retroelement reverse transcriptase
Link
InterPro Scan - TAIR