ET125

CSHL Arabidopsis genetrap mutant lines

Original: ET125

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET125

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2164832 [Map]; Strand: w
      • AT1G07050.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G07051.1 - [+] show detail - MIR847a; miRNA
        Distance: -685; Region: promoter
    Flanking Genome Sequence: ET125 - 3-prime edge 
    CCGTTACCGA CCGTTTTCAT CCCAAATAAG CCGACGGATT ATGAAGACAA 
    AGACTTGGGT CTGAAGCTGA ATCTGAACCA TCAAGAAGTT ATCGATGCTT 
    GGTCTGATCA CCAGAAACCT CTGTGGACAG ATACTTCAAC TCTGGACAAT 
    TCCGTTTATG TTAGTTTTTA TGAATCTCTT TCTTGTTGTG CAAGTTATGA 
    GTAGTGATTA ATCTTGATTA GTCAATATTA ATGATTTAGA GTGTATGCAG 
    AGGGGAGAAG TGCCAGTGAT AGAGGAGAAG AGAAACATGC GAAGAGAAGC 
    AAGTGTGTTA AGGTACAAAG AGAAAAGACA GAGTAGGCTC TTCTCTAAGA 
    AGATAAGGTA CCAAGTCCGA AAACTCAACG CAGATNAACG ACCTCGTTTT 
    AAGGTCTCTT TCTTATTCCT TCTT

AT1G07050.1

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 1772 Blast hits to 1772 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 1711; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07051.1

Model type
miRNA
Short Description
MIR847a; miRNA
Curator Summary
Encodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UCACUCCUCUUCUUCUUGAUG
Link
InterPro Scan - TAIR