1. Home
  2. Mutant Lines
  3. ET12621

ET12621

CSHL Arabidopsis genetrap mutant lines

Original: ET12621

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12621

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 76578 [Map]; Strand: w
      • AT5G01200.1 - [+] show detail - Duplicated homeodomain-like superfamily protein
        Distance: -538; Region: promoter
    Flanking Genome Sequence: ET12621 - 3-prime edge 
    ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGGCTT ATCTATGTGA 
    TAATTAGCAT ATTTGTTTTC TGCTAATATG ATAAATCATA TAAAATTGAA 
    ATGGGATTAA GACTAACCAA ATGCACGTGT CGATACATGA AAGAAAGTAT 
    AACATAATTT CTATTTTATG ACAAAGAAGG TGTAACCAAT CAAATGAAAA 
    AGACCAGAAA ACGACTGTTC AATGGTTTGG CCGGTTCTTA ATTTGTTGTT 
    TAATCAAGAA CATAATAATA TTTAACTAAA GAGCTTATTT GTCAACACGA 
    AATAGCCCAT TCAATATATA ATAACACAAC CATAACTCCA TAAGCTAAAC 
    AAATATACAA AAACAAGTTG GAATATTACA CCTTCGAAAA TTACGTATTT 
    AATTAATTTT TGGCTGGCAA ACAATTTGTT TTTTAACGTA TTTGTACTTT 
    TCATTTATTT TGTTGTAAAT AAACTTCATT TTGTTAATTA ACCTATTTA

AT5G01200.1

Model type
Protein coding
Short Description
Duplicated homeodomain-like superfamily protein
Computational Description
Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT2G38090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR