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Mutant Lines
ET12634

ET12634

CSHL Arabidopsis genetrap mutant lines

Original: ET12634

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12634

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 11207983 [Map]; Strand: w
- AT4G20940.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
  Distance: 1703; Region: intergenic
- AT4G20960.1 - [+] show detail - Cytidine/deoxycytidylate deaminase family protein
  Distance: -3963; Region: intergenic

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATAACGAA 
GCAACGTTCT ATGATCTCAG CCGTCGACGC CCGTGGTCTC ATCATGCACT 
ACGACCTGAG CAATGATTCG TTCCCCGACT CGACCTTCTT GGCCATCTCG 
TCCATCTGCG TGATCGTCAT CTTCCTTGCT ACTCTGAAGC AAAGCAGAGT 
AACAAAGTTC AAACCTGAGC TCGGCAAACA GAGTTTAAAC GCCAAATCCT 
CCGACCATGA GATCACGAAT ATTAAAGGAT GTCACCTCAG CCTTCAACAA 
TTCAACGTTC GCATCCAATC TTGACATCAT CTCGTTCGAC TTTATCTT

5 prime edge [+] show sequence

Chromosome: 4; Position: 11208036 [Map]; Strand: w
- AT4G20940.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
  Distance: 1756; Region: intergenic
- AT4G20960.1 - [+] show detail - Cytidine/deoxycytidylate deaminase family protein
  Distance: -3910; Region: intergenic

TCCTACTTTA TCCCTGCTTC GATATTCGTG CGTTTCGTTT AAGGATTGAG 
ATCGGCGAGT ACAACTTTAT CGGTGCGTCA TTTAAGATGA GCGCATGATC 
GATCTTCTGC TGTGATTCAA ATGTGCAAGT GCAATCGTAG GCAGCTTTAG 
TTCGTCGAAA TGGTGTAAGC GTCGAGCTTG TACGGTGAAT TCTTCGGAGG 
TAACGGCGTT GAGATGATTT GTATAGCGAT TACGGAGGTG TAGGTTTGAC 
ATACATATAT ATATGTATAT ATATATATAC CCCCCCTTTT TTTTTAAAAA 
AAAATCCCCG TGGGGAACCC GGGGGGGTTT TTAAAAAATT TTCCCA

AT4G20940.1

Model type: Protein coding
Short Description: Leucine-rich receptor-like protein kinase family protein
Computational Description: Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: signal transduction, N-terminal protein myristoylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT5G10020.1); Has 124696 Blast hits to 48167 proteins in 1508 species: Archae - 53; Bacteria - 7002; Metazoa - 34401; Fungi - 1693; Plants - 72944; Viruses - 23; Other Eukaryotes - 8580 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20960.1

Model type: Protein coding
Short Description: Cytidine/deoxycytidylate deaminase family protein
Curator Summary: encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis
Computational Description: Cytidine/deoxycytidylate deaminase family protein; FUNCTIONS IN: hydrolase activity, zinc ion binding, diaminohydroxyphosphoribosylaminopyrimidine deaminase activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: APOBEC/CMP deaminase, zinc-binding (InterPro:IPR016192), CMP/dCMP deaminase, zinc-binding (InterPro:IPR002125), Cytidine deaminase-like (InterPro:IPR016193), Riboflavin biosynthesis protein RibD (InterPro:IPR004794); BEST Arabidopsis thaliana protein match is: cytidine/deoxycytidylate deaminase family protein (TAIR:AT3G47390.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR