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ET12639

CSHL Arabidopsis genetrap mutant lines

Original: ET12639

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12639

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8881557 [Map]; Strand: w
      • AT4G15550.1 - [+] show detail - indole-3-acetate beta-D-glucosyltransferase
        Distance: -2230; Region: intergenic
      • AT4G15560.1 - [+] show detail - Deoxyxylulose-5-phosphate synthase
        Distance: -2350; Region: intergenic
    Flanking Genome Sequence: ET12639 - 3-prime edge 
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CATTCTGCTA TACAACGAGG GATGTAAAAA TGAGAAACAT ATAATCATAA 
    TTAGTAGCTA TTTGTTTTTC AAAAAAGTAG AACTTTTTGT ATGAATTAAA 
    TAAAGATTTT TTTTTGGACC ATATCGTCTA GCACTCCTAA CACATGTGTT 
    AAGTCGGGCC TGTAGGACCT ATGGAGCTCA ATTGATCACA AATTTCTCTA 
    AACTCACGAA GATAATTAGG CAAGAATCTC TTTCTCACCC GACTACATTT 
    GCAATTTACA TCAAAGTTCA AGATAAAGAA ACTAATTATT TTGTAAAGAT 
    ATCATGTATA CTCATGTGTG TGTTGATAGT GATGACTGAA GTTTCCGAAA 
    AAACGTGAGA AATTACTGTC TTTCTCAAAG GTTCTACTTT TTATTTTGTA 
    AACCTTGAAC CTTTTTGTCG AGAACTCACA AGACTCTTAT AACATGAATG 
    TCTTTAGTTT CTTATAATTT GTTATCAAGC TTTCTGTCTA AGACAGAAAA 
    TCTTATTGTG TTCTAACTTT GTGTAAACAT ATTTGTATAT TTGTGTTAGA 
    ATGAGATTAA AAAGGAAATA ATGGAACCAT AATTATATAT GAACCCAAAT 
    TCACTTGTTT TATCGAACTA ATTAATAAAA TGTTGCTATC ACAGTTTATT 
    TGCAAGCATG TTTTGAAATG TTTAACTCAT AACATTTTTT TAGGGCCGAC 
    TGTGCAGTCC TCTTATTGAT TAATTACATA

AT4G15550.1

Model type
Protein coding
Short Description
indole-3-acetate beta-D-glucosyltransferase
Curator Summary
UDP-glucose:indole-3-acetate beta-D-glucosyltransferase
Computational Description
indole-3-acetate beta-D-glucosyltransferase (IAGLU); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyltransferase 75B1 (TAIR:AT1G05560.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G15560.1

Model type
Protein coding
Short Description
Deoxyxylulose-5-phosphate synthase
Curator Summary
Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis
Computational Description
CLOROPLASTOS ALTERADOS 1 (CLA1); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826), Transketolase-like, C-terminal (InterPro:IPR015941), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Dehydrogenase, E1 component (InterPro:IPR001017); BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 (TAIR:AT3G21500.2); Has 24450 Blast hits to 24392 proteins in 2940 species: Archae - 267; Bacteria - 15281; Metazoa - 526; Fungi - 278; Plants - 446; Viruses - 0; Other Eukaryotes - 7652 (source: NCBI BLink).
Link
InterPro Scan - TAIR