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ET12649

CSHL Arabidopsis genetrap mutant lines

Original: ET12649

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12649

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1540212 [Map]; Strand: c
      • AT4G03460.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -101; Region: promoter
    Flanking Genome Sequence: ET12649 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG TACTAATTAG 
    CTATCAAAAA CGCAGACTTT TCGGTCAACG AATTAGAAAA ACAAACGGCG 
    ACAAGACCGA TCTCTTGTCG GTTAGTCCAT ATCAGATATT ATCCAATTAA 
    CGCTGTCAGG ACGCTGTTAT GAGACTAAGA GTAGTGCACA CTATCAAAGC 
    CGTCCTCAAT CCTCCACCTC TGCGTTTCCG CCTCTCTTTT TCTGATATTG 
    ATTGTTCCAC CATTTTACCT GTGATACTGA GGGAGGTCGA AACATCTGGA 
    ATATAACTCC GGCCGATTAG CCGTCTCCGC CGCGTTTTGT CACACCGACG 
    ATTTCATTTG AACGACGTTG TAGGCTCACA CAAGTCAAAA GTCGCACTCT 
    TTAAGGTGTG TAATATTGGG CCTATAAAGT TTACAGATGG CCCAGTTTCC 
    AATCAAAGCT TTTAACCTGA ACGACGACGT TTTATAGAGT CTATGTGAGC 
    CTCCTGAAGC TTCGTTAGAG TGTGATTATT TCTTGCTTAT TAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1540129 [Map]; Strand: c
      • AT4G03460.1 - [+] show detail - Ankyrin repeat family protein
        Distance: -18; Region: promoter
    Flanking Genome Sequence: ET12649 - 5-prime edge 
    CTTTATCCCT GCTAATTAGC CTATTATTGC GTCCGCTTTT CTTCAGACTT 
    TCGAGAGTAA TGGAATTTTT GGATAGTAGC TTGGAGAGAT GTTGAATTGG 
    GTTAAGATAG TTGACATTAG AAGTTGAAGA AACCCACAAG TCGTTGGATT 
    TCTATATATT TTAGTATCCC ACTGAATGCT TTCTTCTTTT GGACCATGAC 
    TTGTTTTCTC TGTAATAAAC AAATAAGGTA GACTTGAAAA ACCCTTACAC 
    ATTATAAGGT TTGATCTGAT GAATTATTGA TAAACATATA TACATGCAAA 
    GGCAACAAAC GGTATCTCTT TTTTTTCTGA TGAGAAAGGA AAAACAAAGA 
    AGGTACGCGT CTGTTTCCTT TTAGTTGACC ATTTCTTCTT CCTTGAT

AT4G03460.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03500.1); Has 31827 Blast hits to 15474 proteins in 712 species: Archae - 44; Bacteria - 2495; Metazoa - 17236; Fungi - 2457; Plants - 2857; Viruses - 141; Other Eukaryotes - 6597 (source: NCBI BLink).
Link
InterPro Scan - TAIR