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Mutant Lines
ET12654

ET12654

CSHL Arabidopsis genetrap mutant lines

Original: ET12654

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12654

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 2926707 [Map]; Strand: w
- AT3G09530.1 - [+] show detail - exocyst subunit exo70 family protein H3
  Distance: 0; Region: exon1 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGA 
TGTAGGAGAT CTAGAGGAGA TGGATTCAGG ATCCAAATGC GCACGGTTCA 
TTGAAAGAAT CTGGAGAAAC TCTTTCTGAA GTCGTTTCAT AGCGATCTGC 
ATCAGATTCT GAGCTCTAAG GAGTTTCTCC GAATTTGGAT CTTCTCTAAT 
CAACAAATCC ATGGCGTTCT GCAGTTCCTT CACGCGTTTA ACAAACTTCA 
TC

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 19599032 [Map]; Strand: c
  - AT2G47860.2 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -916; Region: promoter
  - AT2G47860.3 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -916; Region: promoter
  - AT2G47860.1 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: -947; Region: promoter
Flanking Genome Sequence: ET12654 - 5-prime edge
```
CTTAAGCAAA GCTATATTTT GGTAAATATT TTGTGTGTTA GATTTCACAA 
CAAATTACAA TTTCCCACTC TACAAAATCC AAATCCAAAG CCGGATGTGC 
AAGTTTAATT GATTTCATCT TCTTCCTTGG GGTTTTGACA AAAAAGAAAA 
GTAAGAGTG
```

AT2G47860.1

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1); Has 884 Blast hits to 856 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 876; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47860.2

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47860.3

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Computational Description: Phototropic-responsive NPH3 family protein; FUNCTIONS IN: signal transducer activity; INVOLVED IN: response to light stimulus; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT1G03010.1).
Link: InterPro Scan - TAIR

AT3G09530.1

Model type: Protein coding
Short Description: exocyst subunit exo70 family protein H3
Curator Summary: A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description: exocyst subunit exo70 family protein H3 (EXO70H3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H4 (TAIR:AT3G09520.1); Has 786 Blast hits to 774 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 29; Plants - 616; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link: InterPro Scan - TAIR