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ET12657

CSHL Arabidopsis genetrap mutant lines

Original: ET12657

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12657

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4701988 [Map]; Strand: c
      • AT1G13700.1 - [+] show detail - 6-phosphogluconolactonase 1
        Distance: -5965; Region: intergenic
      • AT1G13710.1 - [+] show detail - cytochrome P450, family 78, subfamily A, polypeptide 5
        Distance: 737; Region: intergenic
    Flanking Genome Sequence: ET12657 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGTTGTAG GCATGTATAA 
    CGAACTAACT AATCCATAAA CGAATGTGTG TGTGAAAAAG AACACATTCA 
    AAGTTGAGAT TATGTTTTAT CTGATATAAA GTTTGGAGTT GAAGTTTTCG 
    TTATTGGTAA AAGGAACAAC TGCATATATA ACACTTATAA TCTAATCATC 
    TGTATCGGCC AATGGCCATT TAGACCGTGT AATCAATTAC TCATCAATCC 
    GTTTAACTGA CTCTGTCCGA CTAAGTGAAC AATTTAAGAA AATTTGAGTG 
    TCAATCCATG ACTAAGACAT TAAAATCTGA AAAGATGGTA TATTTTTATA 
    TATATTTTCC CACCTTCCAA TTTGATCATG TCGTAATGAT GGATCAGCAT 
    GTTGCTGATC GTTCTAGAAT CTAATATGTG ACATTATAAT AGCTAGTATA 
    ATGTCCTTTG CCCAATGATT TACTCACTAA CTCACATGTT AGATATTTGG 
    ATCACGTTGT TCAACATGCT AACATTAACA AGTGATCGTC CTATTGTCTA 
    TCATTACTC

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET12657 - 3-prime edge 
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTGCTT 
    ACAAGGAGAT ATATGCAAAC CGGTGGAGTT CTGGTTTAGA ACTCATTATC 
    AAACCGGTTT ACTGCGATTG AATTTGAACT GGTCGTTATG TGATTATATG 
    TCAAAGGGGA TAGTGCTGTA ACTAAACTTG TTTTTTGGTA ATAAAATATT 
    AAAATCCATC GAACCAATTA TTTCCACATT GATTCAAAAC CAACAATCGT 
    TAATCACTTT GTTAAAAAAA AACTTTTGTC ATCGATCTAA AAAAAAAACT 
    TTAAGTACAG TATCAAACCG GTTTAACAAG CAAAAAATAA GCTTTAGTCA 
    ATTTCTCTAA TTTCTTCGGG GAGTAACAAA AGCAAAAATT GTGGAAAAAA 
    TTAGTGACTG ATGGCTATTT TTTTTACTTA CTTTTGGTTT CTCCAAAAAT 
    GTATTGCCTT GCTAACACCA CTATGTCCCT CTAAAGATAT TTGCTAGGAG 
    TAACTCTGTG TCCGGGGCTT TCTGGATTGA TATAATACAA GCAAGACTCC 
    ATTCCCAAAA AAAAAAAATG AAAAATTTA

AT1G13700.1

Model type
Protein coding
Short Description
6-phosphogluconolactonase 1
Computational Description
6-phosphogluconolactonase 1 (PGL1); FUNCTIONS IN: 6-phosphogluconolactonase activity, catalytic activity; INVOLVED IN: pentose-phosphate shunt, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: 6-phosphogluconolactonase, DevB-type (InterPro:IPR005900); BEST Arabidopsis thaliana protein match is: NagB/RpiA/CoA transferase-like superfamily protein (TAIR:AT5G24400.1); Has 3744 Blast hits to 3744 proteins in 1410 species: Archae - 0; Bacteria - 2521; Metazoa - 189; Fungi - 243; Plants - 155; Viruses - 0; Other Eukaryotes - 636 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13710.1

Model type
Protein coding
Short Description
cytochrome P450, family 78, subfamily A, polypeptide 5
Curator Summary
Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth.
Computational Description
"cytochrome P450, family 78, subfamily A, polypeptide 5" (CYP78A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 10 (TAIR:AT1G74110.1); Has 31179 Blast hits to 31066 proteins in 1571 species: Archae - 49; Bacteria - 2905; Metazoa - 11364; Fungi - 6716; Plants - 9120; Viruses - 3; Other Eukaryotes - 1022 (source: NCBI BLink).
Link
InterPro Scan - TAIR