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ET12658

CSHL Arabidopsis genetrap mutant lines

Original: ET12658

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12658

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26673817 [Map]; Strand: w
      • AT1G70730.2 - [+] show detail - Phosphoglucomutase/phosphomannomutase family protein
        Distance: -651; Region: promoter
      • AT1G70730.3 - [+] show detail - Phosphoglucomutase/phosphomannomutase family protein
        Distance: -651; Region: promoter
      • AT1G70740.2 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon6 (3UTR)
      • AT1G70740.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: ET12658 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGTGAT 
    TGTAAATAGC GAGCTGCACA TATAATATTT GTTTCATAAT TTATTTAATT
    TTGCTTTTGA AAAGTAAATT AATTTATTTT TTTGACTGCA GTAGTGATTT
    AGTTTTGTAG TATGATTTGT TATATTAGCG GGAAAAAATT ATGATTCATT
    TGTTACATTT GTATATTAGA ATAATCACTT GTAGTCCCAT TATCTAGGTC
    CCCACTATTG GCCTCGTACG TATAAAAGCA TATTCTCTTG TACGTATTAA
    CGGTACCTTA CTTTAAACAA AACATAAAAC TAAAATGTTT TTTATGCGTT
    TTAAATTATT TTTCAGTTAA AATTTATAAA AAGGGTTTTT GTAAACAATT
    ATTTTGATAG TAAAAGAAAT ACTAACTGAA ATTAGTGGAG AAAATACACA
    AACATATATT TAACTTTCTT TAATTTAAAA TATACAGATT TTGTTTCTTT
    AATTTTTTTT TTCAAATTTT AGTTTCCATT TATTTTTAAA TAAAGAATGA
    CAGGCCATAA TGTTGAATTT TGATTTGCCA TTAAAAAGGG G

AT1G70730.2

Model type
Protein coding
Short Description
Phosphoglucomutase/phosphomannomutase family protein
Curator Summary
Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.
Computational Description
Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6684 Blast hits to 6671 proteins in 2112 species: Archae - 92; Bacteria - 4940; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 769 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70730.3

Model type
Protein coding
Short Description
Phosphoglucomutase/phosphomannomutase family protein
Curator Summary
Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.
Computational Description
Phosphoglucomutase/phosphomannomutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha-D-phosphohexomutase, conserved site (InterPro:IPR016066), Alpha-D-phosphohexomutase, C-terminal (InterPro:IPR005843), Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III (InterPro:IPR016055), Alpha-D-phosphohexomutase, alpha/beta/alpha domain III (InterPro:IPR005846), Alpha-D-phosphohexomutase, alpha/beta/alpha domain II (InterPro:IPR005845), Alpha-D-phosphohexomutase (InterPro:IPR005841), Alpha-D-phosphohexomutase, alpha/beta/alpha domain I (InterPro:IPR005844); BEST Arabidopsis thaliana protein match is: Phosphoglucomutase/phosphomannomutase family protein (TAIR:AT1G23190.1); Has 6668 Blast hits to 6655 proteins in 2105 species: Archae - 91; Bacteria - 4924; Metazoa - 519; Fungi - 202; Plants - 162; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70740.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1); Has 118680 Blast hits to 117148 proteins in 4511 species: Archae - 101; Bacteria - 13535; Metazoa - 44165; Fungi - 9939; Plants - 33069; Viruses - 411; Other Eukaryotes - 17460 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70740.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (TAIR:AT4G23180.1).
Link
InterPro Scan - TAIR