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Mutant Lines
ET12664

ET12664

CSHL Arabidopsis genetrap mutant lines

Original: ET12664

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12664

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 13004680 [Map]; Strand: c
- AT2G30520.1 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: intron3 (CDS)
- AT2G30520.2 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: intron2 (CDS)
- AT2G30520.3 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: intron2 (CDS)

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTTC 
GGTTATTACT ATATAGGTAG AAAAGAAAAA CCTAAACACT AGCCAAAATG 
GAGATCCAAC ACACTTACAA AGAAGTGAGA ATGAGTTCTG AGTAAAATTA 
TACCTTAGCA CCGACGACGT CGACACAACG GCGGACAATA CCAAGATCAC 
GAGAAATAGG TAGGAGAATC TCGCAAGACT TAAGGACGAC AATGGCTCCA 
GAGAGGCTAG AGAGAGCGAC TTGAGAAAGG AAGTCTTGTG TCCGACCAGC 
AAGGTTGTTG TCGCAGTACT TATCGGTCAT CTGAAGAAAC TCGGCTGCGC 
AATGAAGAGC CGCCACGTTC TGAACGGTGA TCTCGAAGTT AACACCGTAA 
CAGAACTTGG CAGCTTTCTC AAATATCTCA GGACCCCCGG GTATATCCGA 
GAGATTGATT C

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 13004594 [Map]; Strand: c
  - AT2G30520.1 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: 0; Region: intron3 (CDS)
  - AT2G30520.2 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: 0; Region: intron2 (CDS)
  - AT2G30520.3 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: 0; Region: intron2 (CDS)
Flanking Genome Sequence: ET12664 - 5-prime edge
```
TCTAGTAAGT TAGTACAGTT TTAGGTATGT TTTTCAATAA AT
```
5 prime edge [+] show sequence
1. Chromosome: 2; Position: 13004600 [Map]; Strand: c
  - AT2G30520.1 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: 0; Region: intron3 (CDS)
  - AT2G30520.2 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: 0; Region: intron2 (CDS)
  - AT2G30520.3 - [+] show detail - Phototropic-responsive NPH3 family protein
    Distance: 0; Region: intron2 (CDS)
Flanking Genome Sequence: ET12664 - 5-prime edge
```
ACCCAATCTA GTAAGTTAGT ACAGTTTTAG GTATGTTTTT CAATAAATGG 
CAAGAATATT TGGTTTGGTT ATTTCATAGT TTGAAATTGA TTTTAGAATT 
TCATCTATCA AATTTACTAA GAAAAATCAG TTTGAGACCA TTGTTCTTCA 
CTTCTTTTGT TCTAGAGTTT ATTATTTAAA ACAAAAATCT ATTTTAATAA 
TAGAGTTTAG ATCTATGATT ACTGTTGTCA GACTATGATT GCGATTTAGA 
TTCGATAGGA ATATTTCATA TTTAATTCGG TTTTTGTGTT TCTTCAACTA 
ATTTATTTCG GTTTGGTTTC CGAATCTTAA ATTGAGCAAA TCATACTTCT 
ACCCTATTCC AGTTCCGGGA GACTCAA
```

5 prime edge [+] show sequence

Chromosome: 2; Position: 13004598 [Map]; Strand: c
- AT2G30520.1 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: intron3 (CDS)
- AT2G30520.2 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: intron2 (CDS)
- AT2G30520.3 - [+] show detail - Phototropic-responsive NPH3 family protein
  Distance: 0; Region: intron2 (CDS)

GTTAGTACAG TTTTAGGTAT GTTTTTCAAT AAATGGCAAG AATATTTGGT 
TTGGTTATTT CATAGTTTGA AATTGATTTT AGAATTTCAT CTATCAAATT 
TACTAAGAAA AATCAGTTTG AGACCATTGT TCTTCACTTC TTTTGTTCTA 
GAGTTTATTA TTTAAAACAA AAATCTATTT TAATAATAGA GTTTAGATCT 
ATGATTACTG TTGTCAGACT ATGATTGCGA TTTAGATTCG ATAGGAATAT 
TTCATATTTA ATTCGGTTTT TGTGTTTCTT CAACTAATTT ATTTCGGTTT 
GGTTTCCGAA TCTTAAATTG AGCAAATCAT ACTTCTACCC TATTCCAGTT 
CCGTGAGACT CAAGTATATA TCTATGTAAT GCAAAATGAA TTACGAGTAT 
AATATTTTAA CATCCATGAA TTTTTGTAAA GCTTGGTTAC AGTGTCTGAT 
ACATTTTCTA TCTATTGATT TTGATATTTA AAAGGCTTGC AACGAGGCAA 
TGTTTCCCTG TCGAACACCA CCAAACTGGT GGACAGAGGA ACTCTGTATC 
TTAGACGTCG ACTTC

AT2G30520.1

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Curator Summary: light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis
Computational Description: ROOT PHOTOTROPISM 2 (RPT2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: phototropism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67385.1); Has 1044 Blast hits to 1009 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 171; Fungi - 0; Plants - 865; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G30520.2

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Curator Summary: light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis
Computational Description: ROOT PHOTOTROPISM 2 (RPT2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: phototropism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67385.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G30520.3

Model type: Protein coding
Short Description: Phototropic-responsive NPH3 family protein
Curator Summary: light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis
Computational Description: ROOT PHOTOTROPISM 2 (RPT2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: phototropism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT5G67385.1); Has 865 Blast hits to 833 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 860; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR