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Mutant Lines
ET12666

ET12666

CSHL Arabidopsis genetrap mutant lines

Original: ET12666

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12666

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2340304 [Map]; Strand: w
- AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
  Distance: -1204; Region: intergenic
- AT3G07340.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 595; Region: intergenic

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTGCTCTCAA 
GTCTTAATAA CTCGTTAACG TCAGTTTCAA TGTTAGATCA TATTTGATAT 
ATGATTTGAT CGTTGCTAGT GTTAACCAGC TGTTTAAGGT GTTCTGTCAT 
TTTCTCCATT GTCTTTGTGG GAGTTATTCA GAAAACAAAG ATACATTAGA 
AAGTCTAATA TGAGTGGTTA TGAGCAAAAA ACCAAATTTG ATTAATTAGG 
ATTATGATGT AGGGATCACG CCGTGATTGA TGGAAACTAT ATAGAACAGA 
GAAGCGTCTC TTTCTATTTA CCTACTATAG CAAAGAGAAC CCGCAACAAG 
TTATCAATCA AGCAAAAATT AATGTCTAAT CAAAAACCAT CTATCTCAAG 
TTGTTGATAA TATCTTACAT GATCATAAAC AATTATACCG CAGACCGGCC 
GGATACTCGA AAAATTGCAA ATACATTGGT CCTGACGGGG TTGAGTGGAT 
CACATACTTG AAAGAAAAAA AAATAGCCGT TCCACACTTA TCTT

5 prime edge [+] show sequence

Chromosome: 3; Position: 2340366 [Map]; Strand: w
- AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
  Distance: -1266; Region: intergenic
- AT3G07340.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 533; Region: intergenic

CTTTCTCCCT ACTTGAGAGT GTATATTGAA AAAGTCAAGC TTAGCTAAGA 
TTTGATGTTT GTGAATATGC TGTAGTACCT ATTATATTTG TTGGAAATAG 
TACATTTGAG CAAATTACAC ACATGTTATT TAGCACAAAG ATAGTTGTCA 
CGCTATGTAA CTCCTGCCGA AAAAAACTCA ATACCAACTT TTTGGTTTCA 
ATGTTAAATC GTATTCCAAC CAAAAACTGC ATACTAACAT TTCATACGCT 
TTAACAAATA ATTAAATACC TTTTCCAAAA ATAAATAAGG AAATAATACA 
CATAAATAAA CTACAAAATC TCACCTAACA TGCAGAAGCT ATATAGTTTT 
GATAATTGAA ATAAGAAAAT TAACTAGTAT CTATCAATTT TTGCAACACA 
CTGTTGTTTT TCCTTCACCA AAAATGTGTA TTTTCTAGGA ATGATCTGTC 
CTTGTTAGCT TC

5 prime edge [+] show sequence

Chromosome: 3; Position: 2340416 [Map]; Strand: w
- AT3G07330.1 - [+] show detail - Cellulose-synthase-like C6
  Distance: -1316; Region: intergenic
- AT3G07340.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 483; Region: intergenic

TTTGATGTTT GTGAATATGC TGTAGTACCT ATTATATTTG TTGGAAATAG 
TACATTTGAG CAAATTACAC ACATGTTATT TAGCACAAAG ATAGTTGTCA 
CGCTATGTAA CTCCTGCCGA AAAAAACTCA ATACCAACTT TTTGGTTTCA 
ATGTTAAATC GTATTCCAAC CAAAAACTGC ATACTAACAT TTCATACGCT 
TTAACAAATA ATTAAATACC TTTTCCAAAA ATAAATAAGG AAATAATACA 
CATAAATAAA CTACAAAATC TCACCTAACA TGCAGAAGCT ATATAGTTTT 
GATAATTGAA ATAAGAAAAT TAACTAGTAT CTATCAATTT TTGCAACACA 
CTGTTGTTTT TCCTTCACCA AAAATGTGTA TTTTCTAGGA ATGATCTGTC 
CTTGTTAGCT

AT3G07330.1

Model type: Protein coding
Short Description: Cellulose-synthase-like C6
Curator Summary: encodes a gene similar to cellulose synthase
Computational Description: Cellulose-synthase-like C6 (CSLC6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: pollen tube development; LOCATED IN: Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Glycosyl transferase family 2 protein (TAIR:AT2G24630.1); Has 4986 Blast hits to 4983 proteins in 1463 species: Archae - 182; Bacteria - 3875; Metazoa - 9; Fungi - 97; Plants - 510; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G07340.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G48560.1); Has 2639 Blast hits to 2308 proteins in 133 species: Archae - 0; Bacteria - 4; Metazoa - 62; Fungi - 52; Plants - 2177; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink).
Link: InterPro Scan - TAIR