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ET12683

CSHL Arabidopsis genetrap mutant lines

Original: ET12683

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12683

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30053825 [Map]; Strand: w
      • AT1G79900.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET12683 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTGGCG GGAGTGGGTT 
    GGGCGAGAGA GATGATGGTG ACGGTGCAGC TCCAAATCTT CTCTAATCTT 
    TTGACACTTT TCTATAAAAC TCCCCAAACT GATTCTCTCT GACTGCCTCA 
    TAAGTCATTA TAATAGTTTC CCCCGGATTG CTTTTTCTTT CTTTTTGCTA 
    ATCATCATCG GTTTCTTCTA ATCGAAAAAA AAAACCAAAA AAAAAGGGG

AT1G79900.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Curator Summary
encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol
Computational Description
BAC2; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G46800.1); Has 25782 Blast hits to 14100 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 10775; Fungi - 7497; Plants - 4679; Viruses - 6; Other Eukaryotes - 2819 (source: NCBI BLink).
Link
InterPro Scan - TAIR