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Mutant Lines
ET12694

ET12694

CSHL Arabidopsis genetrap mutant lines

Original: ET12694

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12694

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 5867636 [Map]; Strand: c
- AT1G17160.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
  Distance: 0; Region: exon1 (5UTR)
- AT1G17160.2 - [+] show detail - pfkB-like carbohydrate kinase family protein
  Distance: 0; Region: exon1 (5UTR)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
TGTGACATAA CAGCGATTTC ATAAAAGTGA AAAATCATTT AAGGATGATG 
AAAGGGATTT CAGTTTCTCA ATCGATCAAT TATAATCCAT ACATCGAATT 
CAATCGACCG CAGCTTCATN CTCACTCGAC CAAANCCCAA TCCAGCTCAA 
TCTCGATTTT CCCGACCTCG ATCCCTCCGT GTTCTCTCAC TCTCCGTCGA 
TCCATCGGCA AATCGGAATC CTAAATCAGC CGTTGACGCA CACGCGCCGC 
CACTGGTGGT TGTGGGATCT GCGAACGCCG ATATCTATGT GGAGATCGAG 
AGATTACCCA AGGAAGGGGA AACCATTTCC GCGAAGACAG GGCAAACGCT 
CGCCGGAGGA AAAGGCGCGA ATCAG

3 prime edge [+] show sequence

Chromosome: 3; Position: 4007561 [Map]; Strand: w
- AT3G12610.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
  Distance: 0; Region: exon1 (CDS)

TTTACCGACC GTTACCGACC GTTTTCATCC CTAGCTGCGA TCCTGATTCG 
GGTCGGGTCA CTGATATTTC TCTCCGGGGA GAATCTGAAG ACGCCATTTT 
CCAAAAGGCA GGCCGGTCCG GTTATATGTC CGGTTCGATT GATCCAGCAG 
TTTGTGACTT AACCGCACTC ACTTCCCTCG TTCTCGCCGA CTGGAAAGGA 
ATCACCGGAG AGATTCCTCC GTGCATTACT TCCCTAGCTT CGCTCCGTAT 
CCTCGATCTC GCCGGCAACA AGATCACCGG GGAGATTCCC GCGGAAATCG 
GCAAACTCTC GAAACTCGCT GTTTTAAACC TCGCCGAGAA TCAAATGTCC 
GGCGAGATTC CGGCGTCACT GACGTCACTC ATCGAGTTGA AGCATCTTGA 
ATTGACGGAA AATGGAATCA CCGGCGTGAT CCCGGCCGAT TTCGGATCGT 
TGAAGATGTT GAGCAGAGTT TTACTGGGCC GTAACGAACT AACCGGGTCA 
ATTCCAGAGT CGATCTCGGG TATGGAACGG TTAGCGGATC TGGATCTATC 
CAAAAACCAT ATCGAAGGTC CGATACCCGA ATGGATGGGT AACATGAAGG 
TACTCTCACT TTTGAATCTC GATTGCAATT CGTTAACCGG TCCAATCCCC 
GGTTCGCTTC TTAGCAATTC CGGGTTTAGA TGTTGCCAAT TTGAGCCCGA 
AATGCGTTGG AAGGAACTAT ACCCGACGTT TTCGG

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: ET12694 - 5-prime edge
```
TTTTACCGAC CGTTACCGAC CGTTTTCATC GCTACTTTTG TGGGT
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 5867587 [Map]; Strand: c
- AT1G17160.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
  Distance: -48; Region: promoter
- AT1G17160.2 - [+] show detail - pfkB-like carbohydrate kinase family protein
  Distance: -48; Region: promoter

CCCTGGTCCA ACTCACAAGT CAGAACCAAC AACTAAACAT ATTTAAGAAT 
TGTTATGATC AGGAAGATAT CAAATACATG AACAAAAAGG ATGGACCATT 
AATGTTATAT ATATGTTAAC CAAAAAATAA GAAACATGAC CATGTTTGGA 
CTGGATCAAT TTAGACAATG CGGAGGAACC ATCTTCCCAG TAGCAGATCC 
ATGAACGTTC TCACACAACG CAATTGCAGG ACCGTCGACT CCATTGTGAG 
TTAAGTTAAT GTCGATTAAT TGAACATCTT TGCAAGGAAA ACTTTTGCTA 
CATTGAAATT TCACAGCCAC TTTATTCTTT GACGTTCCCC AAATGTTCTT 
TAGTGTCACG TTTCGGATCT GAATGTGAGA ATCTCCCTGC AAAAAAACAT 
GATCCAACAT ATTAATTTTA AAGTCGATTA AGATTCTAAG AAGATCGAAA 
TTTGTTTCTT GCATAGTAAG TTACCATATT ACTGCATGGC GGGTAAGGAC 
AATATTTTTG ATCAATGCTG ATAGGATTTT CAACATCTAT CATCTGTAGA 
T

AT1G17160.1

Model type: Protein coding
Short Description: pfkB-like carbohydrate kinase family protein
Computational Description: pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process, D-ribose catabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 24314 Blast hits to 24305 proteins in 2661 species: Archae - 422; Bacteria - 18834; Metazoa - 425; Fungi - 293; Plants - 520; Viruses - 0; Other Eukaryotes - 3820 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G17160.2

Model type: Protein coding
Short Description: pfkB-like carbohydrate kinase family protein
Computational Description: pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 20525 Blast hits to 20525 proteins in 2560 species: Archae - 370; Bacteria - 15982; Metazoa - 398; Fungi - 241; Plants - 483; Viruses - 0; Other Eukaryotes - 3051 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12610.1

Model type: Protein coding
Short Description: Leucine-rich repeat (LRR) family protein
Curator Summary: Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.
Computational Description: DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G20820.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink).
Link: InterPro Scan - TAIR