Home
Mutant Lines
ET12701

ET12701

CSHL Arabidopsis genetrap mutant lines

Original: ET12701

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12701

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 29868431 [Map]; Strand: c
- AT1G79410.1 - [+] show detail - organic cation/carnitine transporter5
  Distance: 0; Region: exon1 (CDS)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACCTCCAA 
TTAAGCAATT TACAAGCACA GAGCTTCTCC TGCTGAATTG CTCGAGCAAG 
ATCGGTGTAA CAACAAATGT TGGTAACTCC ACCATGGCGT TTAGGGCTTC 
GCTCATATAA ATGTTCACTT TTATGTCTCT AACCGCTAAT GGAACTCCAT 
AATACGACAT TCCCAACCCA AACATTATGA TCATAACAAG TGTGACTCTT 
CGAAAAGCCC ATTTTCTAAT GAACAAGTCT TTGATTGAGT AGCTTGAAGT 
TTGCTCTAGT GTTTCTTTTG GACGTAACCT CGAAGATACG GATTCCAAGT 
AACCTCTATT TGCAGGTGAA ATCCGTTTGA GCACTTCAAT GGCTTCTTTG 
TTCTTCCCTT CCAAATGGAG CCAACGCGGT GACTCTAGGG CAAAGAAATA 
GATGAAAATA CTGTGGATTC CTGCAGGAAT GGATGTGCAT AGATAGAGAA 
CTTTCCAAGA AGCGTGTCGG ACAAGGTAAG CGATTCCAGA CAACGACATG 
AACCCTAACA CAAACAGAGT AAACGGAACC ATAGTAGCTC GCGGTCTCCA 
TTTGGTGGAA ATTCGCTCAC TTATCAGAAC TAACGCGTAT GTCCCGGTCT 
GAGAACGCGC GAATCCGATC ACAAACTTTA AGAAGGAGTA GATCCATATG 
TTGGAGGATA AGAAAATAGA GATTCCAGTG AGTGACATTG CGAAACTCGA 
GAAAAAAAGA AGTTGCTTCC GTCCCAAAGG AACC

5 prime edge [+] show sequence

Chromosome: 1; Position: 29868300 [Map]; Strand: c
- AT1G79410.1 - [+] show detail - organic cation/carnitine transporter5
  Distance: 0; Region: exon1 (CDS)

TCGCTTTTGC TCTCGAACTC GGTTCTTTCT TCTGCGCTAG GATTGGATTC 
CATTTAATGG CGATTTATTT GGTTGAGTTA TTTCCTACAT GCGTGAGGAA 
TAGTGCAACA ATGATGCTTA GACAAGCGCT TGTGGTTGGA GGAGCTTGTT 
GCCCACTCAT TGCTTCGCTT GGAAGAAATG TGCCGTCACT CTCTTTTGCA 
GTTTTCGGAT TTGCAATGTC GGGTCTCGGG TTATTCGCTT TGCTTCTTCC 
TGAGACCAAA GGGTTAAGTC TTTGTGATAC AATGGAAGAG CCAGAGCAAA 
GAGACCAAGC CTTGAAGACT AGCCATAGTT GCTGAAAGCA GAGTTTTTTG 
AAAAACCTCT GTTCTTTTAT TGAACTTTCG TATAAAACCC TCTGTTTAGC 
T

AT1G79410.1

Model type: Protein coding
Short Description: organic cation/carnitine transporter5
Computational Description: organic cation/carnitine transporter5 (5-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 6 (TAIR:AT1G16370.1); Has 11548 Blast hits to 11506 proteins in 1434 species: Archae - 261; Bacteria - 5062; Metazoa - 3508; Fungi - 1334; Plants - 912; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink).
Link: InterPro Scan - TAIR