Home
Mutant Lines
ET12702

ET12702

CSHL Arabidopsis genetrap mutant lines

Original: ET12702

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12702

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 10850952 [Map]; Strand: w
- AT4G20050.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: 0; Region: intron3 (CDS)
- AT4G20050.2 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: 0; Region: intron2 (CDS)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATT 
GATGGTTTTG TTTGTTTGTT GACTTGTGTG ACACGTCAGA TAAGCGGAGG 
TACATTAAGA GCATCAAATG ATTTCCCGGT CGATAGGTAC TTAATCGAAC 
TCAAAGACGA ATCGTCAAAG TTACAATACA TCTTCGAATA CATAACTCTC 
AGAGATCTTC TCATCGATTG CAACTACCGC GGCGGAGCAA TCGCCGTCAT 
CAACTCTCTC CGGACAAGCA TAGACAACTG TTACATCACA CGGTTCGGAG 
ACACGAACGG GATTCTTGTC AAAAGTGGAC ACGAGACTTA TATCCGAAAC 
TCGTTTCTTG GTCAACACAT AACCGCCGGT GGAGACAGAG GAGAAAGAAG 
CTTTTCCGGC ACCGCCATCA ATTTGATGGG AAACGATAAC GCCGTTACTG 
ACACCGTTAT ATTCTCCGCC AGGATCGGAG TAATGGTATC GGGACAAGCT 
AACTTATTGT CCGGCGTGCA TTGCTATAAC AAAGCAACCG GTTTTGGAGG 
AACGGGGATT TATTTGAGAT TACCCGGTTT AACTC

AT4G20050.1

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Curator Summary: Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.
Computational Description: QUARTET 3 (QRT3); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G20040.1); Has 103 Blast hits to 103 proteins in 26 species: Archae - 2; Bacteria - 18; Metazoa - 0; Fungi - 3; Plants - 67; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G20050.2

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Curator Summary: Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.
Computational Description: QUARTET 3 (QRT3); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: microsporogenesis, pollen exine formation; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G20040.1); Has 103 Blast hits to 103 proteins in 26 species: Archae - 2; Bacteria - 18; Metazoa - 0; Fungi - 3; Plants - 67; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link: InterPro Scan - TAIR