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ET12704

CSHL Arabidopsis genetrap mutant lines

Original: ET12704

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12704

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19066922 [Map]; Strand: w
      • AT3G51360.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -362; Region: promoter
    Flanking Genome Sequence: ET12704 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACTTGTGGGG TTTAGTTTAT AAAGATAAAG GAACAAGAAA TATTATGATA 
    AGGTTTCTAT GAATAATTAA ATATGAGAGT TGATGTTCAA AAATTGAATT 
    AAATACGATA ATTTCGTTGG CAACATATTC CTTTAATAAC GATCTTTAAA 
    AATCCGTTGA CAAAGACCAA GCACCAGACA AAACGTTGAC CTTCTCCCTC 
    ATATTCCACA CACAAAACAA AACAAACAAG TTTCGTGTAG TAAAAGGAAA 
    CTCAACTAGC AAGAATCAAC ACACCTATTC TTTGTTTTTC TTCTTTAACT 
    TTAGATTCAT AGAGAAAGAT AGGAAGATCA AAGAATGATT TGGAGTAATT 
    GGAAGTTGAG ATGGATGTTT CAGTTTGGAT TCCTCTGTGC TATGAGTTTG 
    GGATTGGCTT CTTCTGTTTC AGGATCACTT TCCTTTGAAT TCACCATAGA 
    TTCTCAGAGC AAGTCAAAAC CGTTCTAGGT GGCCATGGTT TGCCTGAAAT 
    GGGCAGCCTA GACTACT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19067109 [Map]; Strand: w
      • AT3G51360.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -549; Region: promoter
    Flanking Genome Sequence: ET12704 - 5-prime edge 
    TACATTAGGC AATTGGAAAC AATATTGTTT AAATCTGTAC GGAAAACAAT 
    GGGGTGAATT TGTCATAATA TAGAGATAAG AGAGATCGAA TTGCAAATAT 
    GATACAATTA TTTGAAAATA GAAACGTTGA CTATTGATAA GTTTTTGTAC 
    ACGTGCCATG TATATATGGG ACCCAGATCA A

AT3G51360.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G17760.1); Has 2513 Blast hits to 2507 proteins in 240 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 280; Plants - 1618; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
Link
InterPro Scan - TAIR