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ET12706

CSHL Arabidopsis genetrap mutant lines

Original: ET12706

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12706

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 580476 [Map]; Strand: c
      • AT1G02680.1 - [+] show detail - TBP-associated factor 13
        Distance: -149; Region: promoter
    Flanking Genome Sequence: ET12706 - 5-prime edge 
    CGTACACTAG TCGACCGACA TTGTAACTAA GTTCTCACGG TATGGCTCAA 
    ACCGGCCATG GCCTCATGCT CAATATTCTT CGGGAGAAGG AAAAGTTTGT 
    GATCCGATTC ATATACAATC TATCCGGTGC TCATCATATT ACACAAGTAT 
    GTATCAAATC TTTTAGCTTG AGCCTAATTT TGTCCTGTCA AGACTCTTTT 
    TTCTATCTAT ACAAATTTTC TATCATGTTC T

AT1G02680.1

Model type
Protein coding
Short Description
TBP-associated factor 13
Computational Description
TBP-associated factor 13 (TAF13); FUNCTIONS IN: RNA polymerase II transcription factor activity, DNA binding; INVOLVED IN: transcription initiation, transcription from RNA polymerase II promoter; LOCATED IN: transcription factor complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor IID, 18kDa subunit (InterPro:IPR003195), Histone-fold (InterPro:IPR009072); Has 554 Blast hits to 554 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 207; Fungi - 284; Plants - 44; Viruses - 2; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR