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Mutant Lines
ET12709

ET12709

CSHL Arabidopsis genetrap mutant lines

Original: ET12709

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12709

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 18434772 [Map]; Strand: c
- AT1G49780.1 - [+] show detail - plant U-box 26
  Distance: -4453; Region: intergenic
- AT1G49790.2 - [+] show detail - F-box associated ubiquitination effector family protein
  Distance: 579; Region: intergenic

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTACTG ATCGGTGGTA 
TATCCAACAA ACCACAAAAT CTTTCGTTAT CTCATCAATC CATAAAACAG 
CCGCCTTGAT AAACATGTTG ATGATTGTCT CACGATCCTT AGGAGAGTGG 
TCGTGGTAGA CTCCGCAATC GTCTATTCTT CGGAATCTCA CTTTACCTCT 
TTGGAGTGAT AGAGATAGAA GATTGATTTT CTCGCCAATA AACACGTTTA 
AGACGGAAAA ATGGGTACGA GGACTCAACA TCAGTAACCA ATTACCGTAA 
GAGACATTGG AATTCTGTTG CAAAACGATT ATAAAATGGT GGAACATATC 
GAGCTTGGAG GTGACCCTTA TTATCGACAA GTACCCAAGC TCCTATGCAG 
AAACCAGCTT ATTAATCCCG ATGAATTAAA ACGGAAAAGA AAAACTTTGG 
GCTTTCCCTT

AT1G49780.1

Model type: Protein coding
Short Description: plant U-box 26
Computational Description: plant U-box 26 (PUB26); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 25 (TAIR:AT3G19380.1); Has 2464 Blast hits to 2403 proteins in 144 species: Archae - 0; Bacteria - 20; Metazoa - 134; Fungi - 16; Plants - 2081; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G49790.2

Model type: Protein coding
Short Description: F-box associated ubiquitination effector family protein
Computational Description: F-box associated ubiquitination effector family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G43260.1); Has 397 Blast hits to 396 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 395; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR