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Mutant Lines
ET12716

ET12716

CSHL Arabidopsis genetrap mutant lines

Original: ET12716

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12716

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 22538921 [Map]; Strand: c
- AT1G61140.1 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein / zinc fi...
  Distance: 0; Region: exon4 (CDS)
- AT1G61140.3 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein / zinc fi...
  Distance: 0; Region: exon4 (CDS)
- AT1G61140.2 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein / zinc fi...
  Distance: 0; Region: exon4 (CDS)

GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACT CTGCATCACC 
AAATTTAACC CATTTAGTTT CGTTACTCTT GGCTAGGTAG AGCTGTTTGT 
GGTGCCATAT ATGAGTATCC TTTTTCAGTA TCTGTTTGAT AGGAGACTGC 
AGAGCTTGAT GCACCAGACC ACCAACGATT GGTTTCTCCA GAAAGATAAG 
CATCATCCCT GACACTATAT TCCCCTGGAA CTGAACTGTA GACAACTTTC 
TCTGATTCAG CCTCTGGTTT AACCTTCACA TGAACAGTTT TATTATCCTG 
AAAACTGCAT GAATAATTAT TAGGCCGGTC AAGGTCACTA TCAGCTAAAT 
GACTGTCAAA ACTGTTGTTG GGTTTGACAC AGGCAGGAGA AACTGAAGGA 
TTACTTTCAA ACTTGAAACT GATCCCTCTT GCACTAGAAA AATCAATAGG 
AGGTTTCCTT TCTAAAGATC CATTATCCAC TCTTCCATGT CTATCAAAAA 
TCATCCGGCT GGCACCATCC GACTGAGACT CACTTACTCC ACTCTCAACA 
TCATTTACAG CTTCTTCTTT ATTAGGAAAG AACTCAAACG CGAAATTCTG 
AACAGAATTG GGGGTATGGT CTGACAAGGA TGTACCACTT GTATTGTAGC 
AATCTTGTGC AGAAGAGACA TAGTTATCCG CACTGTCACT G

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 22538864 [Map]; Strand: c
  - AT1G61140.1 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein / zinc fi...
    Distance: 0; Region: exon4 (CDS)
  - AT1G61140.3 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein / zinc fi...
    Distance: 0; Region: exon4 (CDS)
  - AT1G61140.2 - [+] show detail - SNF2 domain-containing protein / helicase domain-containing protein / zinc fi...
    Distance: 0; Region: exon4 (CDS)
Flanking Genome Sequence: ET12716 - 5-prime edge
```
GATAAGCTCC AATCATTTTT ACGATTCACA TACATGTTTG CAATATGTTG 
TAGAAGATCC CAGCCCAGTG ACTCAAAACA ATGAGTATAA AGACTTTCAA 
ATTCTACAAG GAGACCGGGA ATATATTCAA CCAAGGGGCA TTGATTCTCA 
ATTCTCAAAT GCCAGCTTTG AATCAGTTCA AAGCCATT
```

AT1G61140.1

Model type: Protein coding
Short Description: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Computational Description: embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, nucleic acid binding, ATP binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G61140.2

Model type: Protein coding
Short Description: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Computational Description: embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G61140.3

Model type: Protein coding
Short Description: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Computational Description: embryo sac development arrest 16 (EDA16); FUNCTIONS IN: helicase activity, DNA binding, zinc ion binding, ATP binding, nucleic acid binding; INVOLVED IN: embryo sac development; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related (TAIR:AT1G11100.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR