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Mutant Lines
ET12739

ET12739

CSHL Arabidopsis genetrap mutant lines

Original: ET12739

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12739

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: ET12739 - 3-prime edge
```
ACCGACCGTT ACCGACTCGT TTTCATCCCA CAACCACCAC AG
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 28678926 [Map]; Strand: w
- AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
  Distance: -4992; Region: intergenic
- AT1G76430.1 - [+] show detail - phosphate transporter 1;9
  Distance: 9; Region: intergenic

ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
AGTCTTTCTT TTAACATGTT TCAATGATTT GCTTCCGAAT AGAACACATA 
ATAATTGTTT CCTAAACTCA GGGCCGGCCC GTGGCATAAG CCACATAAGC 
GACGGCTTAG GGTCTTGAAA TTTTAAACCT TTTTTAGTCA ATTTAATTTT 
AATTAATCAA TAAAGCTGAG TAAAAACTGC AATAACTAGG GAGACTTTTA 
TAGAAACATT AACTCTTTCC AAATCATTAC ATTAGTTGCA GATTCCATTT 
TAATTACTAG GGAGTACTTT ACAAGAGATT TTTTGTGATT CGTGAGGAAT 
AAGTGACTAA AAAAAGGTGG ATGTGATTAT TAAGGTCATA TAATATTGTT 
TT

5 prime edge [+] show sequence

Chromosome: 5; Position: 2948580 [Map]; Strand: w
- AT5G09463.1 - [+] show detail - conserved peptide upstream open reading frame 41
  Distance: -1741; Region: intergenic
- AT5G09470.1 - [+] show detail - dicarboxylate carrier 3
  Distance: 661; Region: intergenic

CCTACTTTCT CCCTGAGAAG ACAGTTAGAT AGAAATTTCA GTGTGAAAAA 
ACAAAACATA GAAATTTCAG TTCACATAAT TGAGACTGGG CTTTGGTTAG 
ATGAGTGGAG TGGCCATGCA AAATGGAGCC TAAACATGGC CTTGGACTTA 
TTTTGGGCCA TGTCTCAGCT TTGGATAACT CTTATACAAT CTCATAAAAC 
AAACACCAAA TTGCCACCAG CTTCAAACTC AAGTAAAAAA ACTTTAGAAA 
GATTTTATTT CTCTTTTATA GAGATAATAT GATCAAAGTC AATAAAAGAA 
AAACATTATT GTTAATCTTA TTTTCTTATA ATTTTTTGCA TAATTTCTAA 
TTTAGATTTT TACAAACAAA CAAAAAAAAT TGTAATTTAG AAGCGATATT 
TCATATTTTC TGTCAACCAA GAAAATAGAA CATAGTACCC AAAGAAAAAA 
AGGAATATAC CAAATGAAGG TCCCCAGCAA AAGTATATCC CCCAAGTCCA 
AGAGACTTGG ACCGTCCGAA AAAGTCCCTT TGCTTCAATC ACTATCAGTT 
TTCGCATTTA CTAAAAAAAA TATTTGTGCA AATAAATAAT TTATTTTTA

AT1G76420.1

Model type: Protein coding
Short Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary: Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Computational Description: CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G76430.1

Model type: Protein coding
Short Description: phosphate transporter 1;9
Curator Summary: Encodes Pht1;9, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).
Computational Description: phosphate transporter 1;9 (PHT1;9); FUNCTIONS IN: phosphate transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: phosphate transporter 1;8 (TAIR:AT1G20860.1); Has 32041 Blast hits to 31917 proteins in 2260 species: Archae - 700; Bacteria - 22282; Metazoa - 2246; Fungi - 4097; Plants - 1720; Viruses - 0; Other Eukaryotes - 996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G09463.1

Model type: Protein coding
Short Description: conserved peptide upstream open reading frame 41
Curator Summary: Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF41 represents a conserved upstream opening reading frame relative to major ORF AT5G09460.1
Computational Description: conserved peptide upstream open reading frame 41 (CPuORF41); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G09470.1

Model type: Protein coding
Short Description: dicarboxylate carrier 3
Curator Summary: Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).
Computational Description: dicarboxylate carrier 3 (DIC3); FUNCTIONS IN: oxidative phosphorylation uncoupler activity, binding, dicarboxylic acid transmembrane transporter activity; INVOLVED IN: transport, mitochondrial transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: cotyledon, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: dicarboxylate carrier 2 (TAIR:AT4G24570.1); Has 24086 Blast hits to 12932 proteins in 445 species: Archae - 0; Bacteria - 4; Metazoa - 10227; Fungi - 7035; Plants - 4424; Viruses - 3; Other Eukaryotes - 2393 (source: NCBI BLink).
Link: InterPro Scan - TAIR