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ET12744

CSHL Arabidopsis genetrap mutant lines

Original: ET12744

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12744

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25230186 [Map]; Strand: w
      • AT1G67340.1 - [+] show detail - HCP-like superfamily protein with MYND-type zinc finger
        Distance: -79; Region: promoter
    Flanking Genome Sequence: ET12744 - 5-prime edge 
    CTTTCTCCCT GGTCAACGAC GCTTTGACCG GGGAATAAGA CAAAAGTACA 
    AGGGTAAACT CGTCTTTTCA GCTTCGCATA CGTATGTACG CAGAAGAGAG 
    AAACAACTCA ACCACTTTGT ATATTTATAA GCCAAAGAGA TTAAAAAGAT 
    AGACACAGAG AGATAAGAGA GAGTCTGTGT AATCCTCTCA AAGACAAAGA 
    AGAAGATTAT GTTACCCTCA AGAAAAACTA AGAGAGTCTT CTCCTGTGAC 
    TTTACTCCGG GAAGAAAACG CCGACGATGT GTTGTTGTTC CTTCCTCTGT 
    TTCTCCGGTA CCGGAAAACA CAACCGGAGC CGATTTGCTA GATTCAATTC 
    CAGACGATCT TGTTGTCTCT ATACTTTGTA AACTTGGCTC TACTTCTCGA 
    TGTCCTGCTG ATTTCATCAA CGTTTTGCTG ACGTAAGCTT TCTCCGGTTA 
    TATCTCTTTT TGTCGGTTTT CGG

AT1G67340.1

Model type
Protein coding
Short Description
HCP-like superfamily protein with MYND-type zinc finger
Computational Description
HCP-like superfamily protein with MYND-type zinc finger; FUNCTIONS IN: binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Tetratricopeptide-like helical (InterPro:IPR011990), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein with MYND-type zinc finger (TAIR:AT5G50450.1); Has 623 Blast hits to 604 proteins in 167 species: Archae - 0; Bacteria - 161; Metazoa - 77; Fungi - 145; Plants - 151; Viruses - 2; Other Eukaryotes - 87 (source: NCBI BLink).
Link
InterPro Scan - TAIR