1. Home
  2. Mutant Lines
  3. ET12749

ET12749

CSHL Arabidopsis genetrap mutant lines

Original: ET12749

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12749

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 72648 [Map]; Strand: w
      • AT5G01190.1 - [+] show detail - laccase 10
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET12749 - 3-prime edge 
    CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTTCG 
    TTGAACAAAT CCGCGTCACT TGTTTCGTTA CCACCTGTTA TTTTTAGATA 
    ATTACGTACG TACGTTTTAC TACTTTTATT TAAGAAATTT TTAGACTCAA 
    AAAGAATGAT ACAACCTTGA TGAAATCATA TAATATATTA TGATGATAAC 
    ATTGATCATG CGGACTTACG TTGAAGGTGT ACTTGCGGAT TGCACCGTGG 
    ACGCATGCCG GGAAGGCGAG CAATGCGAAA AGAACCAAAA TCCGAATTGG 
    AAATACCATT TCCCTTGAAG CTTTTGATGT GTCTTTAAAT GTATACTATG 
    ACTTTTCCTC TTTTGATCTT CTACTGATGA TTTCTCAACT TTCTCTCTTG 
    GTTTTGTGAT TCGAAAATGA TTCATGATCA TTGCCTTATA AAGATGCAAA 
    TGTTGGGTTC TTGTGCTTCG TCAGTTTGGT GAAACTAAAG CTTCAAAGCT 
    TAGAGGGAAA GTATATGTTT CTCTTTGTGG GTTGGAACCT AAGTGTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 72706 [Map]; Strand: w
      • AT5G01190.1 - [+] show detail - laccase 10
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET12749 - 5-prime edge 
    CCTACTTTCT CCCTGAACGA ACAGATCGTT ACCGTTAACG GTAAATTCCC 
    AGGACCCACA ATCTACGCTA ATGAAGACGA CACAATTCTC GTTAACGTCG 
    TTAACAACGT CAAGTATAAC GTCTCTATCC ATTGGTGAGA CTGTCCTCGT 
    ATTTTTAAAT TATCAACTTT TCCTCCCTTA ATTATCACAA AATTAACCTA 
    AAAATTGATT TTGTTGGTTT GCAGGCATGG GATAAGACAA TTAAGAACCG 
    GTTGGGCTGA CGGACCGGCC TACATAACTC AATGTCCAAT TAAGCCGGGT 
    CACAGCTACG TGTATAATTT CACGGTCACG GGTCAACGTG GTACGCTCTG 
    GTGGCACGCA CATGTTCTCT GGCTCCGAGC TACGGTTCAT GGTGCCATCG 
    TGATTCTGCC TAAACTGGGT CTACCTTACC CGTTCCCTAA ACCACATAGA 
    GAAGAAGTCA TCATACTCGG TACTAATTAC AATGACATAA TTATGATAAA 
    CGTTAATTTT TAAAATTGTG GTTTTAACAA TTTGAATTTC CCGGTTTAAT 
    GTTTAATAGG TGAGTGGTGG AAATCAGATA CCGAAACGGT AGTAAATGAA 
    GCATTAAAAT CCGGTTTAGC ACCAAATGTC TCAGATGCTC ACGTCATTAA 
    CGGTCATCCC GGTCTCGTTC CAAATTGTCC GT

AT5G01190.1

Model type
Protein coding
Short Description
laccase 10
Curator Summary
putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
Computational Description
laccase 10 (LAC10); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 9531 Blast hits to 8327 proteins in 1383 species: Archae - 24; Bacteria - 3756; Metazoa - 439; Fungi - 3375; Plants - 1571; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink).
Link
InterPro Scan - TAIR