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ET12755

CSHL Arabidopsis genetrap mutant lines

Original: ET12755

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12755

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7474599 [Map]; Strand: c
      • AT1G21330.1 - [+] show detail - transposable element gene
        Distance: -104; Region: promoter
    Flanking Genome Sequence: ET12755 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGATGGC TCCACGATAA 
    TATTTTAAGA GAGTGTAATT GTAGGATATA TCTTACAATA TCAATAATTC 
    ATATTTTTCT TAACGTAAAA GATTAGGTCA ATCAAACAAA AAAAAGAAAG 
    AAACGATTTG CATCATCCAA ATTAATAAAT ATTAAGACAT ATTTTAAACA 
    ATAAGTTTTT GTTTTCCGAT AAACTTTGAA ATTATGAAAT GCATGTACTC 
    GATAATAATA CTCTTATGTA AAACAAAAAA TTATGAAATG CATGTACTCG 
    ATAATCAAAG TTGAACTAGT GATGGCTCTC AGGAACACTC TTACGTAAAA 
    ATGTGTTGGA TAGTTTAGTA ACCAAGAGAA AACGTCAAAA TGATTGCACA 
    AATTCATAGA CTCTAACAGA CGATGAAGAC ATAGTGTGTT GGAAGGGGAA 
    GGGAGATCGC TTCAAATCAA CTTTCAACAC GAAAGAAACT TGGACGGCCA 
    TAAAAGAATC AAAACCAAGA GCAGAGTGGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7474508 [Map]; Strand: c
      • AT1G21330.1 - [+] show detail - transposable element gene
        Distance: -195; Region: promoter
    Flanking Genome Sequence: ET12755 - 5-prime edge 
    TATTATATAC AGTATGTGTG TAAATGATTT AGTCACTTAC ATTCTCAGCA 
    TCTTGTTCTC GTGAACCGAC AAGACACCAC AAATTTAGTA AACAAAGCAT 
    CGTAACATTT GATCACTTGC ACTCTCTTCT ACATTCTATC GTTTTAACCC 
    TTCCAAGCGT CGGTACAATA TTATTATTGA TTTATTGACA TCATTTTGGT 
    TATCCATTTG CCAAGTTACT TAATTAATAC CGTCAAATCC AATAAGTTAC 
    TATTACATGC ATAATACGTA TAGTCTTTGA TAGCAAATAA AGAACGAATT 
    AAGTTCGAGT TTCTAACAAA AGATATTTGT CCGATCAATT CAACTATATT 
    GTTGTTACAA ATAATTTACC ATCTTGACTG ATAGTTAAGA AAAGAACAGA 
    GAAAACAATT GTATTTAATG AGTATAATCC GCCTTGGAAT AGCGGGGAAT 
    ACTTGTATTA TTTTCATTAC TAACCAAAAT GTTATCTGTC AAGTTAAAGT 
    ACA

AT1G21330.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40680.1); similar to hypothetical protein 23.t00046 [Brassica oleracea] (GB:ABD65629.1); contains domain NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED (PTHR19446:SF34); contains domain REVERSE TRANSCRIPTASES (PTHR19446)
Link
InterPro Scan - TAIR