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ET12782

CSHL Arabidopsis genetrap mutant lines

Original: ET12782

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12782

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21708510 [Map]; Strand: w
      • AT1G58420.1 - [+] show detail - Uncharacterised conserved protein UCP031279
        Distance: 392; Region: intergenic
      • AT1G58430.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase family protein
        Distance: 3055; Region: intergenic
    Flanking Genome Sequence: ET12782 - 3-prime edge
    ATGAAACGGT AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    ATTCTTGGCT AGTAAAGCCT GTTTCTGTAC CACCTGAATT TAGATTCTGG
    TCCATCTTTT CTGAGAAAAA ATATCTTGGG TCAACTTATT GAACTATATT
    TTATAGATCA CGTAAAAAAA CTTTCGTCTC ATTTGCTTTT CTTGGTCTAG
    AAAAGTAGAA AAAACTATAA TAAGGTAGTT TACAAACAAA AAGTTCTTTT
    TTTCTGAAAA ACACTATTCT TTTTATTTTC AACTTTTTTT TATTTATGTT
    GTTTCCATTT TCACTGCATG TGTTTGTCTT TACTTTATTG GTCAATTTAA
    ATCCTGTAGT TTCAGTTTCG GGAAAACGAA TGTTCAACAA ACGAAAACTC
    TAGATTCCTT TACCAAAAAT ATAAAACGAA ACTTTAGATT CTGTCTTAAT
    CTATATAGGA ATTTTTATTG AAATAATTTT GACAGTAACT TTTTTTTGTA
    TAAATCCATG ACAGTAACTT TACATCAAAA TAATTCCATA ACCATGTATA
    ATTAGGAACA TTCTTTAAAA TTAAATCAAA AGAAAAATAA AACTGACAAT
    TAATTTCTAG TATATATTAA AACTTGGATC CTCTAATAGT AACAGCATGT
    GATCTGCTAC GAGGATATAA GAAATCAGAT CCCTTCTTTT GATTCTTTAC
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21708558 [Map]; Strand: w
      • AT1G58420.1 - [+] show detail - Uncharacterised conserved protein UCP031279
        Distance: 440; Region: intergenic
      • AT1G58430.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase family protein
        Distance: 3007; Region: intergenic
    Flanking Genome Sequence: ET12782 - 5-prime edge
    TCCTCCTACT TTCTCCCTGC CAGAATATTA ATAGGCTCTT ATGATTTCAA 
    TTCCGAAAGG GAGAATATGG ATGGCAGATC CAAAATTCGT TAAAATCTGA
    TTTGATCACC TTAATTATAC GTTATAAGAT ACATAAATGA CTAAATGTTG
    ATATTGAAGG CTTATATTTC TATACTAACA AACGACGATA GTAACATATA
    TCACTAAGCT ATATGTCCTT CTCCTTATAA TCAATCCTAA GGTCTTGTAT
    CACTTTTATA CTTTTAGGTA GTCTTTTTTA TCTTTTATGT ATTAGTGGCT
    TAAGCAATTA ATTTAGAATT TATTATGCTT TCTATGAATG ATACAAGTTC
    TATATCATAT CAAGGGACTT ATGATGATTG TTAAAGTTAG AAAAGCAATG
    TTGTACCGCC TAAACACGGA ATATCGATGA TTTACTGAAT TCATGTTTCT
    GGTTGCACTT TTTATATCTA AATACTGAAT TGTTTACACA CATATACTCG
    TGTCGTCATG TGTTCTGGTT GTACTTAAAT AAATAGTATA CTTAACGTAG
    CAGGCCAATA ATTTGTGGGT GCATACATAT TAATTGTTCA TCGAAAACAT
    TAATTTCGCT TTCTCTTTAG TGTGGCTGAA GTCATATGTT CACCAAACTT
    TGTTGCCGCA TTAACAAAAT GAAGCTACCA ACTTATTTTC ATAACTTCAT
    TTACTTACTG GCCATCCCCA TATCT

AT1G58420.1

Model type
Protein coding
Short Description
Uncharacterised conserved protein UCP031279
Computational Description
Uncharacterised conserved protein UCP031279; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031279 (InterPro:IPR016972); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031279 (TAIR:AT1G10140.1); Has 61 Blast hits to 61 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G58430.1

Model type
Protein coding
Short Description
GDSL-like Lipase/Acylhydrolase family protein
Curator Summary
Encodes an anther-specific proline-rich protein.
Computational Description
RXF26; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase family protein (TAIR:AT2G24560.1); Has 3551 Blast hits to 3513 proteins in 245 species: Archae - 0; Bacteria - 416; Metazoa - 0; Fungi - 15; Plants - 3100; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Link
InterPro Scan - TAIR