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Mutant Lines
ET12795

ET12795

CSHL Arabidopsis genetrap mutant lines

Original: ET12795

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12795

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 9939199 [Map]; Strand: w
- AT4G17890.1 - [+] show detail - ARF-GAP domain 8
  Distance: 0; Region: exon7 (3UTR)
- AT4G17890.2 - [+] show detail - ARF-GAP domain 8
  Distance: 0; Region: exon6 (3UTR)
- AT4G17895.1 - [+] show detail - ubiquitin-specific protease 20
  Distance: -496; Region: promoter

CCTACTTTCT CCCTGGTAAG AAGACACGAG TCTCTCACAT GTTTTTGATA 
TTGACAGAGA AAAAAAAGTA AGAAAGAAGC TTTGTCGGAA AACTTCCAAT 
GAGGTTCACG TTTCTCTGTT TTTATTTTAT AGAACTTTTT TTTGAAAACT 
ATTGAGACGT GGCTATTGTT GTTATCATCA AAATCTATAT TGATACTATT 
ATACTCGATA TGTTATAGAC TTTATTAAAA AAACCTTTGT TTGTTTGCAA 
AAAGTGGATT TTTAATCAAA TTTAATTGTG ATGATTACAA TGTCAATTGG 
TTATGCAAGA TATTAATTAA TATGTTTAAG ATTTTTCACT TTTAATAAGT 
AAAATAAAAT ACGTCAAAAA AATTTCCTAA AGATAATGCC AAAAAGGTTA 
AATTATAGAA ATTAAACTAA AATATATTAA AAGTTGACTT AAAAATGCAA 
TGTTGACCAC CGACCTAGGG GAAAACAAAT TTACCGTATC TGGGATAGAA 
TCTCTTCTGT ATCATCTCAG ATAAAGATTA CTACTTAAAC ACACTTTACA 
GTTTTACGAC GCCCAAAATT CAATTCCCGG AGATTAAAAA CCCTAAAACA 
AACAATGGCG ATTCGATTTT CCCTCCCAAT TCAATCATCT CTT

AT4G17890.1

Model type: Protein coding
Short Description: ARF-GAP domain 8
Curator Summary: A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.
Computational Description: ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G17890.2

Model type: Protein coding
Short Description: ARF-GAP domain 8
Curator Summary: A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.
Computational Description: ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G17895.1

Model type: Protein coding
Short Description: ubiquitin-specific protease 20
Curator Summary: Encodes a ubiquitin-specific protease.
Computational Description: ubiquitin-specific protease 20 (UBP20); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR