1. Home
  2. Mutant Lines
  3. ET12798

ET12798

CSHL Arabidopsis genetrap mutant lines

Original: ET12798

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12798

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26434289 [Map]; Strand: w
      • AT1G70200.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET12798 - 5-prime edge
    CTACTTTCTC CCTGCTTAGA CGTAGTACGC GCAGAAGAAA TCAGATATAC 
    AGAACAAGAA GAAGAGGATG ACTGAAAACG AGAGAGAGAA TGAGAATGAA
    GCAAAACGGA GTTGCAGAGC GAAGCTCCGT TCATAGCTAT GTGTTTTCTT
    TTCGTTATCC TCTTCTTCGC CGGAGAAGAA ACTGAGTAGT CGCAACTTGC
    AAACAAAGCG ACTTCAAAGA AATCACATAA ATGGGCCTCT TACGGCCTTA
    ATAAAAAGCC CATTACTTTG GAATACGATC CATTAGACCC ATAAGTTACT
    TTCTGGCCTC AATCATACTC TGTCATAACT TGATGTAACA CCATAAATGA
    TATGTTTGCT TGCTTACATT TAGCATGACT GACCAATAAT TTATATGGAA
    TCGTACGTAA TGGATTTTAT TGAAATATGT ATGAATATGT GAGACAACAT
    CTTTCAAAGG TCCCATGTTT TTATGAACTT CATGGTCATA TTGATATACA
    CTTTTTTGTG CTAATACTGT TTTGATTAGC TGTGACAAAT CAAAGGACCC
    AGCTCGAGTC ATGAATGGAA GTTGTGAGAA TTTATCAGGA AAATAAAAAA
    AAAGACAGAA CAAAAGCTGA AGATAATAAG AATTAAAAAG TAATTTGTAA
    AGTTAAAAAT AAATAAAAAC AGAGCAGAAA ATACAAAAAT GCTAGGCTGT
    GTGTAGACCC AATAGAGGGA TGGGGATTAA GCTTTGTATA TATTTACGTG
    TCTATTTTGG AAA

AT1G70200.1

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 4744 Blast hits to 3664 proteins in 382 species: Archae - 19; Bacteria - 294; Metazoa - 1723; Fungi - 497; Plants - 212; Viruses - 61; Other Eukaryotes - 1938 (source: NCBI BLink).
Link
InterPro Scan - TAIR