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ET12801

CSHL Arabidopsis genetrap mutant lines

Original: ET12801

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12801

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7946614 [Map]; Strand: c
      • AT5G23575.1 - [+] show detail - Transmembrane CLPTM1 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET12801 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCTGAA GCGGCTGGCG 
    CCGATGGTGC TCCACCGCAG CAGCAGCGTG GATTTGGTTC CACGATTTCC 
    GGCATCGTTA GAATCGCCGT CTTTTGGTAT TTTGCTTCTA AGTTCTTTTC 
    TCCTAAGCAG AAACCTATGG ATCCCACTGC TCCGTCTCAG CTCATGACTA 
    ATCTCTTCCA CAAGGGCGAA TCATTGGTAA ACTTTTGTTC TATAGATGAT 
    GAATTTGAAC TTCAATTTAT ATTCTTACTT CTTCTACAAA TGGATTTTAA 
    TAAATCGTGT GTAGTTCTGT AAACATGTTT ATAGTGTCTG CTTTAGAGTT 
    GTGTATGACT AGTGTTGGAT TACTGTTTGA TTGGAGAATT AGGGTTTCAA 
    GATTTTTTTT GTTCATGAAT CTAAATTCGA CCGATGTTTT TTCTCCAGGA 
    TATGTGGTTT TATCTATCAG AGCAGGAGAA GTTCAATGAC TTTGGCAATG 
    ATCGTGCGCT ATATTGGCAT GAGACGAATA TACCTTATGC TGTATGGACA 
    CCAGAGAGTA TTAGGACCAA GTCACTTACG TATTATCCAT CTGAGGTATA 
    AAATCACTTG CTTGACTTTT TAATATATTT TGGTTTCTTT CATATATTGC 
    TTCCTCCAAT ATTATTCTAT TACTAAGCTG CATTGANGTA CTATGTTGTT 
    TTTGGTCGCA GACACTACAG AATAATGGAA GTCTGTATGC TCATATCTTT 
    TTTGCTCGAT CTGGATTTCC ATTGACCCCA CTGATCCTGA ATATCACCTC 
    TTAAAGTTTT AGTAGGACGC ATGGTAAGGC TCTTTTGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 7946542 [Map]; Strand: c
      • AT5G23575.1 - [+] show detail - Transmembrane CLPTM1 family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET12801 - 5-prime edge 
    CTTTCTCCCT GGCTTCGCCA CCGCCGCCCT TTGTCCTGCC GGCGGGGCCA 
    TAGTTTAACG AATCGAGAAA AGGAGGATTG TTTTTAGTTA CGGCGGATTC 
    AAAAGCAGCT GAGATGTGAA TTCGCTGAAG GAGATTCTGA GATTTGTAAA 
    AGCAGAGAGA GTTCGATAGA GAGATATTTA TGGGATTCTT TATTTAATTT 
    ATATTTTTTG TATAAAAATC TGAAAGAAGA TTTGAATAAA CAAAATATAT 
    AACTGTGATG GAGTCGTGAC GATGCTCTTC CAATGCGATT CAAGTAGAAG 
    TGTTTTATGA CACCAACACG TCGCTTTAGA CTTTAGAACA AAGTAACATT 
    TGCATCTAAA GACCTCTGTA TTTTAGATAT TTACTATTAT TGCCCGAACC 
    TTTAGAAAAT AATATTTGTA CCCATATATT TTGTAGATAT AAAATTCTAA 
    AAACATGATT TTGATTTGCC GTTCTGTGAT TCACTCTGAC GTTTGGTAAT 
    ATGTCTAACT TTCATATGAA ATTTTACCAA AAAAAAACAA AATACTAAGG 
    AAACTTGGTT TTAGTCACAA GAACTTAATG CTTCCTTAGA TCCGTCTACT 
    AAAAATTGGA GGATAATAAT CTATAATCTC CTTAGATTTG TCCTAGTATT 
    TAAATGGAGT CTCTCAGATC TCCTACTTTC CGA

AT5G23575.1

Model type
Protein coding
Short Description
Transmembrane CLPTM1 family protein
Computational Description
Transmembrane CLPTM1 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, membrane; EXPRESSED IN: callus, leaf; CONTAINS InterPro DOMAIN/s: Cleft lip and palate transmembrane 1 (InterPro:IPR008429); BEST Arabidopsis thaliana protein match is: Transmembrane CLPTM1 family protein (TAIR:AT5G08500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR