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ET12803

CSHL Arabidopsis genetrap mutant lines

Original: ET12803

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12803

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20049795 [Map]; Strand: c
      • AT3G54140.1 - [+] show detail - peptide transporter 1
        Distance: -1223; Region: intergenic
      • AT3G54150.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 849; Region: intergenic
    Flanking Genome Sequence: ET12803 - 3-prime edge
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
    TGGGATGTGA CATCGAGACT ATGATGTTTC AAGGTGGATT TTGTGCAACG
    TGAGTAAGTA ATCTTTGATC AGTGGTTTGA ACTTTGAACT AATCATTATA
    TCATTTGACA CATTTTAAAA TCAAGAACTA ATAATTAACT ATAAAACTTC
    AACGTTGATA TGAAAGGTTG TTGCGAGGTC CAACTTTAAT AGAATAAGTA
    CGAAAATTGT TGTCAGATCT AACTGAAAAT ATAAGTAAAA GATAACACTT
    GATAGATCCA CAAATCAATG ATGTGCAATT ATATAGAAAT TTGGATCACT
    CATATTTGAT TATTATTTCA CGGGAATCAT AGTAGTTGAC CTTTTGATTC
    TAGTCTAATC CATTGATTCT TCAAATCCAA TTAAGAAAAA CCAATTTGTG
    CTTCAATTCA AAGCATTCTT TTTTTTTCCT TCCGAAATTA AAAACAATTC
    CCCAAAC

AT3G54140.1

Model type
Protein coding
Short Description
peptide transporter 1
Curator Summary
Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source
Computational Description
peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G54150.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G55450.1); Has 989 Blast hits to 984 proteins in 381 species: Archae - 6; Bacteria - 545; Metazoa - 68; Fungi - 151; Plants - 164; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Link
InterPro Scan - TAIR