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ET12811

CSHL Arabidopsis genetrap mutant lines

Original: ET12811

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12811

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25157607 [Map]; Strand: w
      • AT1G67230.1 - [+] show detail - little nuclei1
        Distance: -1284; Region: intergenic
      • AT1G67238.1 - [+] show detail - other RNA
        Distance: 508; Region: intergenic
    Flanking Genome Sequence: ET12811 - 5-prime edge 
    CCTACTTTCT CCCTGCTTTG TATGAAGAAA GCTTTAGCTT TAATATTTGT 
    TTTATGTATC GATAATAATG TTAAGGGGAA TATCTGTTTA TGATAGTTCG 
    TAATTAGTCA TGAAATAATC GTAGTAGAAT TTACTACTCA ATAGTTTACA 
    ATTTCGATGG AGACATGTCA AATAAAAATT GATAAAGTGG GTCGTTGGCT 
    GCCGCCGTCG CTCGCACCTC CAGTTACATC TAATTTTTCT TTTCTCTTCT 
    GAATGACTCA TGTGATATAA CAATCAAAAT GTTCGCAATA AAGACAAGAG 
    GGCAATCAAC TACATGAAAA CATTACATCT ATGTAATGCA TTTATCATTT 
    TCAAACACAT TCGTAGCTAA AAACGGTAGT TTTGTGATTC ATATAATTGC 
    TATCGTTCAT CTCACTCGA

AT1G67230.1

Model type
Protein coding
Short Description
little nuclei1
Curator Summary
Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure.
Computational Description
LITTLE NUCLEI1 (LINC1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nucleus organization; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nuclear matrix constituent protein-related (TAIR:AT1G13220.2); Has 314297 Blast hits to 138342 proteins in 3965 species: Archae - 3454; Bacteria - 70538; Metazoa - 123746; Fungi - 25476; Plants - 17143; Viruses - 1173; Other Eukaryotes - 72767 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G67238.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR