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ET12822

CSHL Arabidopsis genetrap mutant lines

Original: ET12822

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12822

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22063893 [Map]; Strand: c
      • AT1G59930.1 - [+] show detail - MADS-box family protein
        Distance: -2412; Region: intergenic
      • AT1G59940.1 - [+] show detail - response regulator 3
        Distance: 1724; Region: intergenic
    Flanking Genome Sequence: ET12822 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCT CCCTACTTGA AGGGAGGTAT 
    AGTTTCTTTG TAACATGACT AAACATGCCT TGTTTGTTTT TTTTGTGTTC 
    GCTCAAACAA ATCATGTACG CTGTCATGTT ATATGTATTA AGTAGTAAAT 
    AAACTTTTAC AAAAAGATAA AATAACAATA ATCTAAAAAT ACTCAAATTG 
    AACAAAACAA AAGTTGAATG TAAATACTCC CTTTGTTTCT AAGCAATGGA 
    TTTTTGAGAG TTTTCATACA TATTATGAAA ACATATTAAA AGTTGATTAT 
    AAATATATCA TTTTTGTGAT TTACA

AT1G59930.1

Model type
Protein coding
Short Description
MADS-box family protein
Computational Description
MADS-box family protein; BEST Arabidopsis thaliana protein match is: MADS-box family protein (TAIR:AT1G59920.1); Has 225 Blast hits to 221 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G59940.1

Model type
Protein coding
Short Description
response regulator 3
Curator Summary
Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.
Computational Description
response regulator 3 (ARR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 4 (TAIR:AT1G10470.1); Has 60077 Blast hits to 59393 proteins in 2784 species: Archae - 301; Bacteria - 52871; Metazoa - 21; Fungi - 539; Plants - 1521; Viruses - 7; Other Eukaryotes - 4817 (source: NCBI BLink).
Link
InterPro Scan - TAIR