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ET12829

CSHL Arabidopsis genetrap mutant lines

Original: ET12829

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12829

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26742495 [Map]; Strand: w
      • AT1G70940.1 - [+] show detail - Auxin efflux carrier family protein
        Distance: -559; Region: promoter
    Flanking Genome Sequence: ET12829 - 5-prime edge
    CCTACTTTAT CCCTGGGCTC TGGCATGCCC ATCCCCAAAA GTAGAGTGCC 
    ACATGTAGAC CTTCTTCTTA AGATCTAACT CAGATGCTAT TTGTACAAGT
    AAAAAATGTG GCAGACTCAG TTTCTATTTT TCCATATTTT ACTTTAATCT
    TCATGAATCA TAAAAAATGA AAAATCAAGC ACATGAATGT CACTGAAATT
    ATTCAACAAT ATTCTTATTT ATCAGTTATT TTAATTATTG GACTATTTAT
    GTGTATGTTG TTATCTACAA TATGTCCGTT TCAATCAGTC GAACAAAAAA
    TACTAGATTT TAGTTATGTA GTATAAAATA TAAAAATGTT GAAAAACACT
    CTAACCATTA ATTTGTATTA TTTTAAACTT TCCATATGAT GAGATGTATT
    ATTCAATATA ATAATAAAAA GAATATTATT TAATAATTAA ACAAAAACAT
    AATAAATCTT ATAAACAATA TCTTAAAAGA AAAGAACTAT ATTGTTATTT
    TTTTGATAAG ATCGATAAAA AATGTAACAT ACTAAAGAAT AAATAAAATA
    AAATAAATTA GTAAAAAGGA ACTTGGGTGG TCACGTATTT GCTGTATAAA
    GAGGTGTAAA GTGGCATCCT TCCTTAAATT ATATCCTCAA AAACCAAACT
    TGCTCACTCC TTCACACACA CACTGCTCCC AAGTCCTCT

AT1G70940.1

Model type
Protein coding
Short Description
Auxin efflux carrier family protein
Curator Summary
A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.
Computational Description
PIN-FORMED 3 (PIN3); FUNCTIONS IN: auxin:hydrogen symporter activity, transporter activity; INVOLVED IN: in 8 processes; LOCATED IN: lateral plasma membrane, plasma membrane, vesicle membrane, cell surface; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G23080.1); Has 1983 Blast hits to 1757 proteins in 550 species: Archae - 37; Bacteria - 1198; Metazoa - 14; Fungi - 0; Plants - 487; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink).
Link
InterPro Scan - TAIR