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ET12853

CSHL Arabidopsis genetrap mutant lines

Original: ET12853

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12853

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13465558 [Map]; Strand: c
      • AT5G35200.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET12853 - 3-prime edge 
    AGGTATTTTA CCGACCGTTA CCGACCGTTT TATCCCTACT CCTTAAACTA 
    CTCTGTGATC CACCACCACC TGACATTTCG TTTCTCCCTC CTTAAACAAT 
    AGAAACCCTG AAAATATTTA ACCTTGTAAA CAGTCTTCGA CTTTCACAAA 
    CTCATCAACA AAACCTAAAG ATGAAAACTT TTCTCTTGAA TCACAAAACC 
    CTTATGTCAG CTAAGAACAT AAACATCAAA ATCTACCCAA AAACACAAAC 
    TTTTCATTGT TTGATCAATA CCCATAAGCC CTAGATTCAT CAATAACCAA 
    ATCAGTCCGA GAAACATGAG AAAACAACGA ATCGAGATCC GTAAAGGAGA 
    A

AT5G35200.1

Model type
Protein coding
Short Description
ENTH/ANTH/VHS superfamily protein
Computational Description
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT2G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR