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ET12875

CSHL Arabidopsis genetrap mutant lines

Original: ET12875

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12875

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 7395526 [Map]; Strand: c
      • AT2G17010.1 - [+] show detail - Mechanosensitive ion channel family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET12875 - 3-prime edge
    AAACGGTAGA GCATTTTACC GACCGTTACC GACCGTTTTC ATCCCTATTC 
    TTGATCAACA TCAAGTGTGA TCTCTTCATT ATTTCTACCT CTCCATTGCC
    GATTCACAGG CTCTCCAGCG ACCATTTTCG TTGGAGATTC ATCAACCGGT
    AGCTTCCCGT GCACGAAATC GAAACTACCG CTTAATCTAT CGCCTTTTCG
    ACTAATAGCG ATTGGATCTT TATCACTTGT TCTCACCGCC GTGTGATCCG
    TTGACGTTCC AGTAGTGTTG TCTTGCCAGA ATTTGTAACT GGCATCACGT
    TCTACAGGCG CGTTACGACC ATCGTCGAGG CTAGAACGAG TGCTGTCGGG
    TTTCTGGTCA TCGACCACCA TGCCGGAATG ATCAGGATGG TGATCGTGGA
    GAATTGGCAG ATGTTCAGGG CTTGGCTCGC TTTGATCTCC GGGGCTTCGA
    ATTTGTTTGT ATGAGCTATG AGATTTGAAG GAATTTCTGA AATCCATTTG
    AAAATTAATT GTTATTATTA AATCTAAGAA GAAAAATTTG CTTAACAAAA
    TTACGATTTT TTAGAAAAAA GAAACAAAAA CTTCGCCGAT TGTTGTGATG
    CATGGTACAA AAGCTTACGT TAATTAGGAA TAAACGTTAC GTGTACATAA
    TGGCATGAG

AT2G17010.1

Model type
Protein coding
Short Description
Mechanosensitive ion channel family protein
Computational Description
Mechanosensitive ion channel family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Membrane protein, At2g17000, predicted (InterPro:IPR016688), Mechanosensitive ion channel MscS (InterPro:IPR006685), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920); BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel family protein (TAIR:AT2G17000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR