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ET12882

CSHL Arabidopsis genetrap mutant lines

Original: ET12882

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12882

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17821950 [Map]; Strand: c
      • AT4G37900.1 - [+] show detail - Protein of unknown function (duplicated DUF1399)
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: ET12882 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAACCACA ACCTGCCACA 
    ACCACCACAG TGACCACCTG TGCTTCTTGC AATGCATGTT CCCACTTAGC
    TCCTTCGAAA AGCACCTAGC ACCACCGT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17821882 [Map]; Strand: c
      • AT4G37900.1 - [+] show detail - Protein of unknown function (duplicated DUF1399)
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: ET12882 - 5-prime edge
    CTACTTTATC CCTGGTTGTG GTGGATGTGG AGGTGGAGGT GGATGTGGTG 
    GTGGTGGTAG GTGCGGTGGG ATGACAAAGA TAGAAAGCTG CGGCGGCGGA
    TCCTGCACTG GCGGTTCCAC TGGCTGCGGT AATTGCGGTG GAGGATGTGG
    TAATATGATG AAGAACAATG CTAATGGAAA TGCTCCATCA GTAGAAAACG
    ACGCAGTTAC AGCTTGATTA TTCTAATCAA CAAAAGTGAT ATATATTATA
    TGGTTATGTA ATGTTAATAT AGTCAACAAA ATAATGAAAC TGATGGAGAT
    GTTGTTAAAA ACGTGCTTAT CATAATTCAT AAGTTGTAAT AAATAACAGA
    TAGCTTCATA TAAAATTTGG ATTATGTAAA GTCTTATCTG TAAACAAACG
    TTTAATTGTT TCCTTTATTC AACAAAGGAT TCATATTGTT AATCTACATA
    TTA

AT4G37900.1

Model type
Protein coding
Short Description
Protein of unknown function (duplicated DUF1399)
Computational Description
Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink).
Link
InterPro Scan - TAIR