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ET12900

CSHL Arabidopsis genetrap mutant lines

Original: ET12900

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET12900

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15950923 [Map]; Strand: w
      • AT2G38100.1 - [+] show detail - proton-dependent oligopeptide transport (POT) family protein
        Distance: -695; Region: promoter
    Flanking Genome Sequence: ET12900 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTACTTT TGACGAGCGA 
    TCATGCGTGA TGTGTACGTT TGAGTTTGGG TGATCAAACT ATGTTCAGAT 
    TCGTCGGATT TAATTGGTGA GACTGAGATA TATTTCGTAA GACCTTTTTT 
    TTGTTCCCAC AATAAAATTT TGTAAGTTTT GTCTTGTTTT CTTACTTTAA 
    TGGATTTTGT TTGGTTTGGC CGTCAAGAAT GTGTTACCTA TAGGTTGTTA 
    TGAACTGGAA AAAGTTCAGG TCTCCTACAA AATAGTTAGT TTATCTTCAG 
    CTTTCTGTAT ATTGAAT

AT2G38100.1

Model type
Protein coding
Short Description
proton-dependent oligopeptide transport (POT) family protein
Computational Description
proton-dependent oligopeptide transport (POT) family protein; FUNCTIONS IN: amino acid transmembrane transporter activity, uracil transmembrane transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 2766 Blast hits to 2715 proteins in 326 species: Archae - 0; Bacteria - 547; Metazoa - 329; Fungi - 2; Plants - 1871; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR