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ET12911

CSHL Arabidopsis genetrap mutant lines

Original: ET12911

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12911

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 124544 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron6 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron6 (CDS)
    Flanking Genome Sequence: ET12911 - 5-prime edge 
    CCTACTTTCT CCCTGGTCAA GCCAGAGTCA AGTGTCCCAG AAACTTGGCA 
    TGCCTTGGCC ATAGCCTAAG ATAATGACCA GAAAAGGTTT TAACAACTCA 
    GTCCATGATG AACCTCAGAA AACAATGCGT TTGGAGAATG TGGAAATTTT 
    GGATTAAAAC TGGCCTAGAA GAATATATAG TCTAAATAAT ACAAAATTAT 
    GAAAAAGAAA TGTCTGCAGG TACTTGTTTG TAATACCAGT AACCAAACTA 
    ACTTGTCACT ATTCCTAACA AAACTAGAGA AAGGAAAATC AGATAGCAAT 
    GGCCTAGGCA GATTAGTACC AGGTTGTAAT TAGCTTAGTA ACACACCTGG 
    ATCAGTGCAC AGCTTGACAC CTTATCTTC

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR