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Mutant Lines
ET12921

ET12921

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

embryo lethal (unconfirmed)

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET12921

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 2763770 [Map]; Strand: c
  - AT3G09040.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
  - AT3G09050.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -881; Region: promoter
Flanking Genome Sequence: ET12921 - 3-prime edge
```
AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCTCTCCC 
TGGCACAGGT TGATAAAACA ATCGAAAAAG TGAATTTATT TGGAAAAATC 
TGATTCTCAA ACAATGATAC AAAACTCCTT AAGACCTTTC CTGGTTTCCC 
AATGCTGGAA TACACCCATA GCCATTGAAT TCCACGCCGT TACCTCTTTT
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 2763671 [Map]; Strand: c
- AT3G09040.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT3G09050.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: -980; Region: promoter

ACAAATTCAT TGCAGTATGA TTCAAATGGG GCTAGAACGC AACTCGTATT 
GTGGAGGGGC TTTAGTTGAT ATGTATGCCA AGTGTGACCG TATTAGTGAT 
GCTCGACGAG TTTTTGAATG GATAGTGGAT CCTAATACAG TTTGCTGGAC 
GTGTTTGTTT TCTGGCTATG TGAAGGCTGG TTTGCCAGAG GAAGCTGTCT 
TAGTATTTGA AAGGATGCGG GATGAAGGCC ATCGGCCTGA TCATTTAGCT 
TTTGTGACTG TTATAAATAC GTACATCAGG TTGGGGAAGC TAAAGGATGC 
ACGTCTGTTG TTTGGGGAGA TGTCAAGCCC CCATCTTCAC CAAATCGACC 
ATGAATTACT GGAAAAACAA TGTCCACAGC AGAAACAAGA TGCTCGGCCA 
ATTCGGATAA TGACGAGAAT CCCTGTGCAA GACTACAGTA TGAAACAAAC 
TAGCCACTCA GCTAATTTGG TCACTGCTAT TGTCCCATAA CCAATTTTTC 
AAACCGTTCA TCT

AT3G09040.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 73401 Blast hits to 14698 proteins in 289 species: Archae - 0; Bacteria - 19; Metazoa - 251; Fungi - 280; Plants - 71776; Viruses - 0; Other Eukaryotes - 1075 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09050.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 120 Blast hits to 120 proteins in 47 species: Archae - 4; Bacteria - 10; Metazoa - 33; Fungi - 2; Plants - 44; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Link: InterPro Scan - TAIR