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ET12924

CSHL Arabidopsis genetrap mutant lines

Original: ET12924

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12924

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 307437 [Map]; Strand: w
      • AT5G01800.1 - [+] show detail - saposin B domain-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET12924 - 5-prime edge 
    TCGGTTTTTG ATCTATCATC ATTAAATTTG GTAATATATA GATCTCACGA 
    GGAAACATGG GCGGTAGATT TGGAGTCCTC CTAGTCCTCT TCCTCTTGAG 
    CTGGTCTTGT CATGCTACAA ACCCGATTCT TCTCGAACCA TTCGGTAAGA 
    ACATTTTTGA AGGCATCTAG AGTCTCTCTT GCACCTGTTT CTAATTCAAA 
    TTTGTTAAAA TCTGTTCACT GGATTATTTG AATACGTTAC GTTTTCAGAA 
    AGCATTCAAT CTGATATAGA CATCCTGATG TATGTTTTTT TTTTAAATGG 
    GGCTAAAAA

AT5G01800.1

Model type
Protein coding
Short Description
saposin B domain-containing protein
Computational Description
saposin B domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139), Saposin-like (InterPro:IPR011001), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138); BEST Arabidopsis thaliana protein match is: saposin B domain-containing protein (TAIR:AT3G51730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR